RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 DHCR7Q9UBM7 475 aaKnown RBP6.99□□□□□ -1.29
SYNE1-213ENST00000448038 MTCH2Q9Y6C9 303 aa6.99□□□□□ -1.29
SYNE1-213ENST00000448038 TRPM7Q96QT4 1865 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 NPIPA5A0A0B4J1W7 369 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 NPIPA7E9PJI5 369 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 RPP14O95059 124 aaKnown RBP6.98□□□□□ -1.29
SYNE1-213ENST00000448038 HPRP00739 348 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 NPIPA8P0DM63 369 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 ADORA3P0DMS8 318 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 GPR4P46093 362 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 TBC1D25Q3MII6 688 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 OR8J2Q8NGG1 315 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 ZFPM2Q8WW38 1151 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 RSPRY1Q96DX4 576 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 OR52A5Q9H2C5 316 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 RHBDL2Q9NX52 303 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 SERGEFQ9UGK8 458 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 SLC6A14Q9UN76 642 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 PCDHA9Q9Y5H5 950 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 TDRD15B5MCY1 1934 aaKnown RBP6.98□□□□□ -1.29
SYNE1-213ENST00000448038 TRAPPC13A5PLN9 417 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 VSTM2BA6NLU5 285 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 H0YAE9 185 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 VILLO15195 856 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 YY2O15391 372 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 MNDAP41218 407 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 EIF1AXP47813 144 aaKnown RBP6.98□□□□□ -1.29
SYNE1-213ENST00000448038 GCGRP47871 477 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 SLC6A9P48067 706 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 IST1P53990 364 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 OR2B6P58173 313 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 VLDLRP98155 873 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 TFF2Q03403 129 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 ZSWIM7Q19AV6 140 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 DCST2Q5T1A1 773 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 RPL13AP3Q6NVV1 102 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 FAM131AQ6UXB0 335 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 CROCCP3Q8IVE0 287 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 ETFBKMTQ8IXQ9 262 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 ANKFN1Q8N957 763 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 RSC1A1Q92681 617 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 OR1F2PQ96R84 312 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 TCF7L1Q9HCS4 588 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 NANSQ9NR45 359 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 DCAF13Q9NV06 445 aaKnown RBP6.98□□□□□ -1.29
SYNE1-213ENST00000448038 ZNF670-ZNF695F2Z2N8 137 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 LOC110117498-PIK3R3F6TDL0 507 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 J3QLW9 94 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 FBP2O00757 339 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 KHDRBS3O75525 346 aaKnown RBP6.98□□□□□ -1.29
SYNE1-213ENST00000448038 SYNGR4O95473 234 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 IL9P15248 144 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 ZNF19P17023 458 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 STAT5AP42229 794 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 PER3P56645 1201 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 GPLD1P80108 840 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 FGL2Q14314 439 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 C18orf63Q68DL7 685 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 TMEM184AQ6ZMB5 413 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 CYHR1Q6ZMK1 362 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 YIPF7Q8N8F6 280 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 POC5Q8NA72 575 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 OR4K5Q8NGD3 323 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 UBASH3BQ8TF42 649 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 FKBP10Q96AY3 582 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 SLC41A3Q96GZ6 507 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 CCDC115Q96NT0 180 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 OR7D2Q96RA2 312 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 TUBB1Q9H4B7 451 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 GALNT8Q9NY28 637 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 SPHK1Q9NYA1 384 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 MUTYHQ9UIF7 546 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 LRRC42Q9Y546 428 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 ATG2BQ96BY7 2078 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 METTL12A8MUP2 240 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 IL33O95760 270 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 CD63P08962 238 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 FURINP09958 794 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 HSD11B1P28845 292 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 SDC2P34741 201 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 KCNJ5P48544 419 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 CRISP1P54107 249 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 MVKQ03426 396 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 NPRL3Q12980 569 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 PIN1Q13526 163 aaPredicted RBP6.98□□□□□ -1.29
SYNE1-213ENST00000448038 ZNF846Q147U1 533 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 TAB1Q15750 504 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 DCAF12Q5T6F0 453 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 ARL9Q6T311 187 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 KRT77Q7Z794 578 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 CHERPQ8IWX8 916 aaKnown RBP6.98□□□□□ -1.29
SYNE1-213ENST00000448038 RAB2BQ8WUD1 216 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 MND1Q9BWT6 205 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 PINK1Q9BXM7 581 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 TRPV4Q9HBA0 871 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 ABCB9Q9NP78 766 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 CD93Q9NPY3 652 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 PPIL1Q9Y3C6 166 aa6.98□□□□□ -1.29
SYNE1-213ENST00000448038 SOCS2O14508 198 aa6.97□□□□□ -1.29
SYNE1-213ENST00000448038 FRS3O43559 492 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms