RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 FRG2CA6NGY1 282 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 LSM1O15116 133 aaKnown RBP13.52□□□□□ -0.25
USE1-202ENST00000445667 ACOX3O15254 700 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 SUSD5O60279 629 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 PLOD3O60568 738 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 UGT2B11O75310 529 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 REM1O75628 298 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 CT45A8P0DMV1 189 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 CT45A9P0DMV2 189 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 NEFHP12036 1026 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 NAGAP17050 411 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 SDC1P18827 310 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 GDF1P27539 372 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 NTSP30990 170 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 TRPC1P48995 793 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 RPP38P78345 283 aaKnown RBP13.52□□□□□ -0.25
USE1-202ENST00000445667 CT45A2Q5DJT8 189 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 TBCELQ5QJ74 424 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 FNDC7Q5VTL7 733 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 CES4AQ5XG92 561 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 TMEM107Q6UX40 140 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 IKBIPQ70UQ0 350 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 NUP54Q7Z3B4 507 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 SLC34A3Q8N130 599 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 MARVELD2Q8N4S9 558 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 OR6Y1Q8NGX8 325 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 TMBIM1Q969X1 311 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 ERP27Q96DN0 273 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 FCRL1Q96LA6 429 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 ZNF597Q96LX8 424 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 AMDHD1Q96NU7 426 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 GNRHR2Q96P88 292 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 SLC6A15Q9H2J7 730 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 TP63Q9H3D4 680 aaPredicted RBP13.52□□□□□ -0.25
USE1-202ENST00000445667 METTL7AQ9H8H3 244 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 ACAD8Q9UKU7 415 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 OR14I1A6ND48 311 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 AQP7O14520 342 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 GNB5O14775 395 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 TO15178 435 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 ITM2AO43736 263 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 PEX11AO75192 247 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 ERN1O75460 977 aaKnown RBP13.51□□□□□ -0.25
USE1-202ENST00000445667 LYPLA1O75608 230 aaPredicted RBP13.51□□□□□ -0.25
USE1-202ENST00000445667 SNX4O95219 450 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 TUBBP07437 444 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 ENDOUP21128 410 aaKnown RBP13.51□□□□□ -0.25
USE1-202ENST00000445667 HTR1EP28566 365 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 MC3RP41968 323 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 SERPINB4P48594 390 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 MASP1P48740 699 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 ZNF385BQ569K4 471 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 ZNF585AQ6P3V2 769 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 NPSR1Q6W5P4 371 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 ZNF551Q7Z340 670 aaPredicted RBP13.51□□□□□ -0.25
USE1-202ENST00000445667 PACS2Q86VP3 889 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 SLC44A2Q8IWA5 706 aaPredicted RBP13.51□□□□□ -0.25
USE1-202ENST00000445667 EID3Q8N140 333 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 OR4N2Q8NGD1 307 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 PHF10Q8WUB8 498 aaKnown RBP13.51□□□□□ -0.25
USE1-202ENST00000445667 CIDECQ96AQ7 238 aaPredicted RBP13.51□□□□□ -0.25
USE1-202ENST00000445667 SDCCAG3Q96C92 435 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 NTNG2Q96CW9 530 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 C3orf30Q96M34 536 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 VSTM2LQ96N03 204 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 BTBD9Q96Q07 612 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 CCT7Q99832 543 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 STMN4Q9H169 189 aaPredicted RBP13.51□□□□□ -0.25
USE1-202ENST00000445667 ZNF395Q9H8N7 513 aaPredicted RBP13.51□□□□□ -0.25
USE1-202ENST00000445667 GALNT9Q9HCQ5 603 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 TAS2R9Q9NYW1 312 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 SPRR3Q9UBC9 169 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 B4GALT7Q9UBV7 327 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 C19orf53Q9UNZ5 99 aaPredicted RBP13.51□□□□□ -0.25
USE1-202ENST00000445667 NINQ8N4C6 2090 aa13.51□□□□□ -0.25
USE1-202ENST00000445667 ZNF407Q9C0G0 2248 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 A0A087WV62 115 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 UPK1AO00322 258 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 BCKDKO14874 412 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 HCN1O60741 890 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 ICOSLGO75144 302 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 SKAP2O75563 359 aaPredicted RBP13.5□□□□□ -0.25
USE1-202ENST00000445667 TRAPPC6AO75865 159 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 BCKDHAP12694 445 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 AGAP20933 346 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 SERPINB5P36952 375 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 PTGDSP41222 190 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 PMPCAQ10713 525 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 ZNF155Q12901 538 aaPredicted RBP13.5□□□□□ -0.25
USE1-202ENST00000445667 MPP2Q14168 576 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 CHI3L2Q15782 390 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 TNFAIP8L3Q5GJ75 292 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 WDR53Q7Z5U6 358 aaPredicted RBP13.5□□□□□ -0.25
USE1-202ENST00000445667 PPP1R14CQ8TAE6 165 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 NEIL3Q8TAT5 605 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 PPCDCQ96CD2 204 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 ELP4Q96EB1 424 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 TMEM41AQ96HV5 264 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 COL21A1Q96P44 957 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 ADOQ96SZ5 270 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms