RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 MRI1Q9BV20 369 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 SDHAF3Q9NRP4 125 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 NUP188Q5SRE5 1749 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 KDM3BQ7LBC6 1761 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 CTDSP2O14595 271 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 HCRTO43612 131 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 ETFAP13804 333 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 RPL10P27635 214 aaKnown RBP17.72■□□□□ 0.43
SHANK3-203ENST00000445220 DCUN1D3Q8IWE4 304 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 PRDM9Q9NQV7 894 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 TUBG2Q9NRH3 451 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 RXFP3Q9NSD7 469 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 GFOD1Q9NXC2 390 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 INSL5Q9Y5Q6 135 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 A0A1B0GV50 99 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 ANKRD34BA5PLL1 514 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 FUCA1P04066 466 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 ITPRIPL2Q3MIP1 535 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 UGT3A2Q3SY77 523 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 GPR157Q5UAW9 335 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 C22orf39Q6P5X5 142 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 C6orf120Q7Z4R8 191 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 AMIGO3Q86WK7 504 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 WDTC1Q8N5D0 677 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.72■□□□□ 0.43
SHANK3-203ENST00000445220 GORASP2Q9H8Y8 452 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 FANCFQ9NPI8 374 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 TDP1Q9NUW8 608 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 WASF3Q9UPY6 502 aa17.72■□□□□ 0.43
SHANK3-203ENST00000445220 TRAV18A0A075B6X5 111 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 ACOT7O00154 380 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 SOD2P04179 222 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 PFKMP08237 780 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 CD3GP09693 182 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 MPC1LP0DKB6 136 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 GP1BBP13224 206 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 NFATC2Q13469 925 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.71■□□□□ 0.43
SHANK3-203ENST00000445220 SHFQ7M4L6 423 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 C12orf40Q86WS4 652 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 SLC38A3Q99624 504 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 IGSF5Q9NSI5 407 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 MARCH4Q9P2E8 410 aaPredicted RBP17.71■□□□□ 0.43
SHANK3-203ENST00000445220 E2F3O00716 465 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 RAD51DO75771 328 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 MAS1P04201 325 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 CSF1P09603 554 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 ACRP10323 421 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 ADRB3P13945 408 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 ZNF16P17020 682 aaPredicted RBP17.71■□□□□ 0.43
SHANK3-203ENST00000445220 MMP12P39900 470 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 RAP2BP61225 183 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 RPS27AP62979 156 aaKnown RBP17.71■□□□□ 0.43
SHANK3-203ENST00000445220 UBA52P62987 128 aaKnown RBP17.71■□□□□ 0.43
SHANK3-203ENST00000445220 FAM214AQ32MH5 1076 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 C12orf45Q8N5I9 185 aaPredicted RBP17.71■□□□□ 0.43
SHANK3-203ENST00000445220 TXNDC15Q96J42 360 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 ACTL8Q9H568 366 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 APMAPQ9HDC9 416 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 THSD1Q9NS62 852 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 LRFN1Q9P244 771 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 ZCWPW2A0A1B0GU75 182 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 ZNF623O75123 536 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 SOCS5O75159 536 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 C1GALT1C1LP0DN25 315 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 MAGEA3P43357 314 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 SEC13P55735 322 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 POU6F2P78424 691 aaPredicted RBP17.71■□□□□ 0.43
SHANK3-203ENST00000445220 GPM6BQ13491 265 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 HES5Q5TA89 166 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 OR9Q2Q8NGE9 314 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 TERB2Q8NHR7 220 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 VRK1Q99986 396 aaPredicted RBP17.71■□□□□ 0.43
SHANK3-203ENST00000445220 NIPAL2Q9H841 368 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 GRXCR1A8MXD5 290 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 AP1G1O43747 822 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 MGAT3Q09327 533 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 STEAP3Q658P3 488 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 ALKBH2Q6NS38 261 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 BEND4Q6ZU67 534 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 CMKLR1Q99788 373 aa17.71■□□□□ 0.43
SHANK3-203ENST00000445220 PKLRP30613 574 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 VEZF1Q14119 521 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 GTDC1Q4AE62 458 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 FAM205BPQ63HN1 556 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 MAMDC4Q6UXC1 1216 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 PGAP1Q75T13 922 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 PRSS58Q8IYP2 241 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 UMODL1-AS1Q8N2C9 162 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 ADAMTS16Q8TE57 1224 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 GPR52Q9Y2T5 361 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 UPP1Q16831 310 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 KIAA1211LQ6NV74 962 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 C3orf33Q6P1S2 294 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 PLBD1Q6P4A8 553 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 AVL9Q8NBF6 648 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 WDR20Q8TBZ3 569 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 MALSU1Q96EH3 234 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 ZNF778Q96MU6 729 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 C17orf62Q9BQA9 187 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms