RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CEP350Q5VT06 3117 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 IGHV5-51A0A0C4DH38 117 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 KIF1CO43896 1103 aaKnown RBP5.64□□□□□ -1.51
VPS50-205ENST00000441602 OR10H3O60404 316 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 LDB3O75112 727 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 CPNE6O95741 557 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 LGI1O95970 557 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 CHRM4P08173 479 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 GUSBP08236 651 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 CCDC159P0C7I6 412 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 PABPC4LP0CB38 370 aaKnown RBP5.64□□□□□ -1.51
VPS50-205ENST00000441602 IL7RP16871 459 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 STT3AP46977 705 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 HLCSP50747 726 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 HMGA2P52926 109 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 ST3GAL3Q11203 375 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 SQSTM1Q13501 440 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 HLA-DQA1Q5Y7H0 255 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 HEPHL1Q6MZM0 1159 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 FAM111BQ6SJ93 734 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 DGLUCYQ7Z3D6 616 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 GPR141Q7Z602 305 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 GALNT5Q7Z7M9 940 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 SLC25A45Q8N413 288 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 OR51Q1Q8NH59 317 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 OIT3Q8WWZ8 545 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 CDS1Q92903 461 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 SLC35A4Q96G79 324 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 MUS81Q96NY9 551 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 MBOAT4Q96T53 435 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 G6PC3Q9BUM1 346 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 CNPPD1Q9BV87 410 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 UCK2Q9BZX2 261 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 AMBRA1Q9C0C7 1298 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 GAREM1Q9H706 876 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 SYNPO2LQ9H987 977 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.64□□□□□ -1.51
VPS50-205ENST00000441602 VNN3Q9NY84 501 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 SELENONQ9NZV5 590 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 AKAP7Q9P0M2 348 aaPredicted RBP5.64□□□□□ -1.51
VPS50-205ENST00000441602 SEMA5BQ9P283 1151 aa5.64□□□□□ -1.51
VPS50-205ENST00000441602 DLGAP1O14490 977 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 C1QCP02747 245 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 MSL3P1P0C860 447 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 ACP2P11117 423 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 NELFEP18615 380 aaKnown RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 ALAS2P22557 587 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 CD1CP29017 333 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 YAP1P46937 504 aaKnown RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 GABRA4P48169 554 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 DAPP51397 102 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 PSPHP78330 225 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 IGLV3-21P80748 117 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 TEKQ02763 1124 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 DUSP2Q05923 314 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 PPP1R8Q12972 351 aaKnown RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 NPRL3Q12980 569 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 DSG2Q14126 1118 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 ZNF267Q14586 743 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 HLA-BQ31612 363 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 C6orf141Q5SZD1 244 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 DCST2Q5T1A1 773 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 ZNF691Q5VV52 312 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 NKAIN2Q5VXU1 208 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 TTLL10Q6ZVT0 673 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 PRSS41Q7RTY9 318 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 TMEM179BQ7Z7N9 219 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 TSPYL5Q86VY4 417 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 BPHLQ86WA6 291 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 OR4C15Q8NGM1 316 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 IPCEF1Q8WWN9 437 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 ANKRD9Q96BM1 317 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 ZC3H10Q96K80 434 aaKnown RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 GABARAPL3Q9BY60 117 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 SPRTNQ9H040 489 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 ZNF768Q9H5H4 540 aaKnown RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 CXorf21Q9HAI6 301 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 ZNF304Q9HCX3 659 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 ZNF443Q9Y2A4 671 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 OR10H1Q9Y4A9 318 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 ARHGEF17Q96PE2 2063 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 A0A1B0GX78 115 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 FAM227AF5H4B4 570 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 B4GAT1O43505 415 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 FOXS1O43638 330 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 PCDHGA12O60330 932 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 FAM20BO75063 409 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 NME6O75414 186 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 NKX2-2O95096 273 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 OR5F1O95221 314 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 ANGPTL1O95841 491 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 ANKRD34CP0C6C1 535 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 TNFRSF1BP20333 461 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 GABRA3P34903 492 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 TRHRP34981 398 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 KRT20P35900 424 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 CXCR4P61073 352 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 CHRNEQ04844 493 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 COX10Q12887 443 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 APOFQ13790 326 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms