RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 TLR6Q9Y2C9 796 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 PRG3Q9Y2Y8 225 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-214ENST00000441542 FCF1Q9Y324 198 aaKnown RBP7.12□□□□□ -1.27
HDAC9-214ENST00000441542 OR10H1Q9Y4A9 318 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-214ENST00000441542 ZC3H12DA2A288 527 aaKnown RBP7.12□□□□□ -1.27
HDAC9-214ENST00000441542 SH3D21A4FU49 640 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 FAM183AA6NL82 134 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 TMEM229AB2RXF0 380 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 H7C2Y5 167 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 M0R3H8 397 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 BET1O15155 118 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 PRAMEF4O60810 478 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 IL1RNP18510 177 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 RAD52P43351 418 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 VEGFCP49767 419 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 LIM2P55344 173 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 MEF2AQ02078 507 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-214ENST00000441542 DOC2AQ14183 400 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 UBXN11Q5T124 520 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 PRAMEF9Q5VWM5 478 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 MLIPQ5VWP3 458 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 OR5M10Q6IEU7 315 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 NHLRC1Q6VVB1 395 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 IQCHQ86VS3 1027 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 SERPINA12Q8IW75 414 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 TMEM163Q8TC26 289 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 HSD17B8Q92506 261 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 ZNF578Q96N58 590 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-214ENST00000441542 TINAGL1Q9GZM7 467 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-214ENST00000441542 MVB12BQ9H7P6 319 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 EMC7Q9NPA0 242 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 CXXC1Q9P0U4 656 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-214ENST00000441542 NOD1Q9Y239 953 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 PRELID3BQ9Y3B1 194 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 PTCH2Q9Y6C5 1203 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 OR2W5A6NFC9 320 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 A8MVJ9 347 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 ARHGEF33A8MVX0 844 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 ANKRD66B4E2M5 251 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 SGCEO43556 437 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 HYAL3O43820 417 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-214ENST00000441542 ETHE1O95571 254 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 OSMP13725 252 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 RAB3AP20336 220 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 ITGB7P26010 798 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 SLC6A1P30531 599 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 SLC11A2P49281 568 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 VGLL4Q14135 290 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 PLK5Q496M5 336 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 ZNF385BQ569K4 471 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 RETSATQ6NUM9 610 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 ZCCHC12Q6PEW1 402 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 FAM198BQ6UWH4 519 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 C7orf61Q8IZ16 206 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 KRT78Q8N1N4 520 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 OR2T4Q8NH00 348 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 GEMIN6Q8WXD5 167 aaKnown RBP7.12□□□□□ -1.27
HDAC9-214ENST00000441542 ATOH1Q92858 354 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-214ENST00000441542 PTP4A1Q93096 173 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 OR4K3Q96R72 315 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 SLC6A15Q9H2J7 730 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 TNFRSF10DQ9UBN6 386 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 TRPS1Q9UHF7 1281 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 CD84Q9UIB8 345 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 CDV3Q9UKY7 258 aaKnown RBP7.12□□□□□ -1.27
HDAC9-214ENST00000441542 ENPP4Q9Y6X5 453 aa7.12□□□□□ -1.27
HDAC9-214ENST00000441542 GLTPD2A6NH11 291 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 PRSS44E7EML9 344 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 H3BSH0 61 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 ARPC1BO15143 372 aaKnown RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 FRS3O43559 492 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 MPZL2O60487 215 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 PRAMEF11O60813 436 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 PTP4A3O75365 173 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 GPR32O75388 356 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 CLDN7O95471 211 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 IGHA2P01877 340 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 EPHX1P07099 455 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SNRPBP14678 240 aaKnown RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 CXCL2P19875 107 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 ATP5A1P25705 553 aaKnown RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SLC6A4P31645 630 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 ACVR1BP36896 505 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 RNF144AP50876 292 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 PTSQ03393 145 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 TLE2Q04725 743 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SRSF11Q05519 484 aaKnown RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 CHRNA6Q15825 494 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SYT14P1Q58G82 188 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 CCNJQ5T5M9 372 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 RFLNAQ6ZTI6 216 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 MEIOBQ8N635 442 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 FAM181AQ8N9Y4 354 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 OR8J1Q8NGP2 316 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 WDR20Q8TBZ3 569 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 ADAMTS19Q8TE59 1207 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SPRYD4Q8WW59 207 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 CNOT9Q92600 299 aaKnown RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 FBXO32Q969P5 355 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms