RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 MBD2Q9UBB5 411 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 PPIEQ9UNP9 301 aaKnown RBP5.61□□□□□ -1.51
PTPRR-204ENST00000440835 CAB39Q9Y376 341 aaPredicted RBP5.61□□□□□ -1.51
PTPRR-204ENST00000440835 PSAT1Q9Y617 370 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 UTP20O75691 2785 aaKnown RBP5.61□□□□□ -1.51
PTPRR-204ENST00000440835 DIDO1Q9BTC0 2240 aaKnown RBP5.61□□□□□ -1.51
PTPRR-204ENST00000440835 NBPF19A0A087WUL8 3843 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 A0A087WXM4 84 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 TRBC2A0A5B9 178 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 OR6C65A6NJZ3 312 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 CENPBD1B2RD01 187 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 SCO2O43819 266 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 KLHL2O95198 593 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 SLC16A8O95907 504 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 RBP1P09455 135 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 ABOP16442 354 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 ARNTP27540 789 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 CD96P40200 585 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 XCR1P46094 333 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 MAN2A2P49641 1150 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 P2RX3P56373 397 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 SLC26A5P58743 744 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 ATP6V0D1P61421 351 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 CTBP1Q13363 440 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 FLOT2Q14254 428 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 FASTKQ14296 549 aaKnown RBP5.61□□□□□ -1.51
PTPRR-204ENST00000440835 C3AR1Q16581 482 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 FAM83EQ2M2I3 478 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 HKDC1Q2TB90 917 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 CCSMST1Q4G0I0 132 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 ZNF295-AS1Q8N0V1 137 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 BEST3Q8N1M1 668 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 RNF148Q8N7C7 305 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 BHLHE22Q8NFJ8 381 aaPredicted RBP5.61□□□□□ -1.51
PTPRR-204ENST00000440835 OR4K1Q8NGD4 311 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 FAM57AQ8TBR7 257 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 TRIM54Q9BYV2 358 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 THAP1Q9NVV9 213 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 CNOT11Q9UKZ1 510 aaKnown RBP5.61□□□□□ -1.51
PTPRR-204ENST00000440835 CFL2Q9Y281 166 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 OR14I1A6ND48 311 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 GABRR3A8MPY1 467 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 NIPSNAP2O75323 286 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 CLPXO76031 633 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 AHSGP02765 367 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 ALDOAP04075 364 aaKnown RBP5.61□□□□□ -1.51
PTPRR-204ENST00000440835 C2P06681 752 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 BPGMP07738 259 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 FHP07954 510 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 IGFBP2P18065 325 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 SAT1P21673 171 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 MATN1P21941 496 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 HOXC12P31275 282 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 GALNSP34059 522 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 ADH7P40394 386 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 CYB561P49447 251 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 CCR8P51685 355 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 PKNOX1P55347 436 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 OR4D2P58180 307 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 MLF1P58340 268 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 BIKQ13323 160 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 GNA13Q14344 377 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 CAPN13Q6MZZ7 669 aaPredicted RBP5.61□□□□□ -1.51
PTPRR-204ENST00000440835 ZFP1Q6P2D0 407 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 PAPD4Q6PIY7 484 aaKnown RBP5.61□□□□□ -1.51
PTPRR-204ENST00000440835 CYHR1Q6ZMK1 362 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 UBE2R2Q712K3 238 aaPredicted RBP5.61□□□□□ -1.51
PTPRR-204ENST00000440835 VN1R4Q7Z5H5 301 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 RPS19BP1Q86WX3 136 aaKnown RBP5.61□□□□□ -1.51
PTPRR-204ENST00000440835 ZNF540Q8NDQ6 660 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 TTLQ8NG68 377 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 C16orf52Q8NHV5 167 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 ANKRD60Q9BZ19 345 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 PELI2Q9HAT8 420 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 NMRAL1Q9HBL8 299 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 POLE4Q9NR33 117 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 LANCL2Q9NS86 450 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 SLC17A6Q9P2U8 582 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 SH3BGRL2Q9UJC5 107 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 TMEM5Q9Y2B1 443 aa5.61□□□□□ -1.51
PTPRR-204ENST00000440835 TRAV6A0A075B6T7 132 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 SAGE2PA6NJ88 616 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 CCRL2O00421 344 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 P2RX6O15547 441 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 PLIN3O60664 434 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 SEC24DO94855 1032 aaPredicted RBP5.6□□□□□ -1.51
PTPRR-204ENST00000440835 ALX3O95076 343 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 IL33O95760 270 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 ECDO95905 644 aaPredicted RBP5.6□□□□□ -1.51
PTPRR-204ENST00000440835 LTA4HP09960 611 aaKnown RBP5.6□□□□□ -1.51
PTPRR-204ENST00000440835 HIST1H2AGP0C0S8 130 aaPredicted RBP5.6□□□□□ -1.51
PTPRR-204ENST00000440835 COX4I1P13073 169 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 TFEBP19484 476 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 HIST1H2ADP20671 130 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 ZNF10P21506 573 aaPredicted RBP5.6□□□□□ -1.51
PTPRR-204ENST00000440835 IMPA1P29218 277 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 CHRNB4P30926 498 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 IDH3AP50213 366 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 PHC1P78364 1004 aa5.6□□□□□ -1.51
PTPRR-204ENST00000440835 CSNK1G2P78368 415 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms