RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 SLC22A3O75751 556 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 NADKO95544 446 aaPredicted RBP16.32■□□□□ 0.2
CCDC188-201ENST00000439765 CBX7O95931 251 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 EDN3P14138 238 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 ADSLP30566 484 aaPredicted RBP16.32■□□□□ 0.2
CCDC188-201ENST00000439765 GPR85P60893 370 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 CEBPEQ15744 281 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 MPEG1Q2M385 716 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 HLA-DQA1Q5Y7H0 255 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 PAOXQ6QHF9 649 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 OR7G1Q8NGA0 311 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 OR52R1Q8NGF1 315 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 ZNF675Q8TD23 568 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 CIDECQ96AQ7 238 aaPredicted RBP16.32■□□□□ 0.2
CCDC188-201ENST00000439765 CTHRC1Q96CG8 243 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 TEX37Q96LM6 180 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 SLX1AQ9BQ83 275 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 CCDC106Q9BWC9 280 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 DPY30Q9C005 99 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 PCDHGB6Q9Y5F9 930 aa16.32■□□□□ 0.2
CCDC188-201ENST00000439765 MYO1GB0I1T2 1018 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 CDK2AP1O14519 115 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 PDPK1O15530 556 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 NME6O75414 186 aaPredicted RBP16.31■□□□□ 0.2
CCDC188-201ENST00000439765 PRPS1L1P21108 318 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 MPIP34949 423 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 MC3RP41968 323 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 NR0B1P51843 470 aaKnown RBP16.31■□□□□ 0.2
CCDC188-201ENST00000439765 C21orf58P58505 322 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 KLF10Q13118 480 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 ZNF385BQ569K4 471 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 PIGGQ5H8A4 983 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 OPN5Q6U736 354 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 TMEM64Q6YI46 380 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.31■□□□□ 0.2
CCDC188-201ENST00000439765 RIMKLAQ8IXN7 391 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 GPALPP1Q8IXQ4 340 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 KRTCAP2Q8N6L1 136 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 FITM2Q8N6M3 262 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 PSD4Q8NDX1 1056 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 PPCDCQ96CD2 204 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 FRMD6Q96NE9 622 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 ITPAQ9BY32 194 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 REEP4Q9H6H4 257 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 TMEM45AQ9NWC5 275 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 TAS2R7Q9NYW3 318 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 SH3BP4Q9P0V3 963 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 ARMCX1Q9P291 453 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 ZNF639Q9UID6 485 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 MAPRE3Q9UPY8 281 aa16.31■□□□□ 0.2
CCDC188-201ENST00000439765 G3V3Y1 287 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 SLC22A2O15244 555 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 IL12AP29459 219 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 HPCAL1P37235 193 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 RFC3P40938 356 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 HSPB3Q12988 150 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 PDE7AQ13946 482 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 C4orf17Q53FE4 359 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 TMEM107Q6UX40 140 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 FUNDC1Q8IVP5 155 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 ZNF441Q8N8Z8 693 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 FAM98AQ8NCA5 519 aaKnown RBP16.3■□□□□ 0.2
CCDC188-201ENST00000439765 OR7G2Q8NG99 324 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 OR9I1Q8NGQ6 314 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 NR4A3Q92570 626 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 SPACA9Q96E40 222 aaPredicted RBP16.3■□□□□ 0.2
CCDC188-201ENST00000439765 AMDHD1Q96NU7 426 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 TSPAN10Q9H1Z9 355 aaPredicted RBP16.3■□□□□ 0.2
CCDC188-201ENST00000439765 GLIPR2Q9H4G4 154 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 TIMMDC1Q9NPL8 285 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 KLF13Q9Y2Y9 288 aaPredicted RBP16.3■□□□□ 0.2
CCDC188-201ENST00000439765 CRYBG3Q68DQ2 2970 aa16.3■□□□□ 0.2
CCDC188-201ENST00000439765 A0A0G2JMM0 328 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 A0A1W2PPB8 328 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 A0A1W2PRS3 328 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 KIR3DP1A8MWS1 328 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 SCAMP2O15127 329 aaKnown RBP16.29■□□□□ 0.2
CCDC188-201ENST00000439765 CRYABP02511 175 aaKnown RBP16.29■□□□□ 0.2
CCDC188-201ENST00000439765 EFNA1P20827 205 aaPredicted RBP16.29■□□□□ 0.2
CCDC188-201ENST00000439765 CLNS1AP54105 237 aaKnown RBP16.29■□□□□ 0.2
CCDC188-201ENST00000439765 AGKQ53H12 422 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 FAM91A1Q658Y4 838 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 ZNF324BQ6AW86 544 aaPredicted RBP16.29■□□□□ 0.2
CCDC188-201ENST00000439765 HIST2H2BCQ6DN03 193 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 LYPD8Q6UX82 237 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 RTL4Q6ZR62 310 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 TRPM8Q7Z2W7 1104 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 PRR22Q8IZ63 422 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 GLB1L3Q8NCI6 653 aaPredicted RBP16.29■□□□□ 0.2
CCDC188-201ENST00000439765 FAM13CQ8NE31 585 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 OR5M3Q8NGP4 307 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 NUDT8Q8WV74 236 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 ADIPOR1Q96A54 375 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 ERP27Q96DN0 273 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 MTERF3Q96E29 417 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 ZBTB18Q99592 522 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 NXF5Q9H1B4 397 aaKnown RBP16.29■□□□□ 0.2
CCDC188-201ENST00000439765 CCDC167Q9P0B6 97 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 CAPN7Q9Y6W3 813 aa16.29■□□□□ 0.2
CCDC188-201ENST00000439765 CREBBPQ92793 2442 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms