RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SLC9B1Q4ZJI4 515 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 CT45A2Q5DJT8 189 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 TBCELQ5QJ74 424 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 CROCCQ5TZA2 2017 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 ZCCHC12Q6PEW1 402 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 BNC2Q6ZN30 1099 aaPredicted RBP10.88□□□□□ -0.67
HSPG2-206ENST00000439717 GK5Q6ZS86 529 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 ACAD11Q709F0 780 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 NUP54Q7Z3B4 507 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 CNTRLQ7Z7A1 2325 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 SLC34A3Q8N130 599 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 FBXW8Q8N3Y1 598 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 CPSF7Q8N684 471 aaKnown RBP10.88□□□□□ -0.67
HSPG2-206ENST00000439717 ZFP62Q8NB50 900 aaPredicted RBP10.88□□□□□ -0.67
HSPG2-206ENST00000439717 FAM13CQ8NE31 585 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 NUP43Q8NFH3 380 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 OR2M7Q8NG81 312 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 OR10G3Q8NGC4 313 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 OMA1Q96E52 524 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 MAGED4Q96JG8 741 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 FAM173AQ9BQD7 235 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 LMF2Q9BU23 707 aaKnown RBP10.88□□□□□ -0.67
HSPG2-206ENST00000439717 CLMPQ9H6B4 373 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 NEUROD4Q9HD90 331 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 GPR45Q9Y5Y3 372 aa10.88□□□□□ -0.67
HSPG2-206ENST00000439717 CHCHD2Q9Y6H1 151 aaPredicted RBP10.88□□□□□ -0.67
HSPG2-206ENST00000439717 ANKUB1A6NFN9 424 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 OR6C70A6NIJ9 312 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 RNASET2O00584 256 aaKnown RBP10.87□□□□□ -0.67
HSPG2-206ENST00000439717 ABCB7O75027 752 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 ABCB1P08183 1280 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-206ENST00000439717 ZNF24P17028 368 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 KRT20P35900 424 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 KIR3DL1P43629 444 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 CDK9P50750 372 aaKnown RBP10.87□□□□□ -0.67
HSPG2-206ENST00000439717 TDGF1P3P51864 188 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 CORO7P57737 925 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 FBXW4P57775 412 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 GPR85P60893 370 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 PSG6Q00889 435 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 KCNC4Q03721 635 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 ELOAQ14241 798 aaKnown RBP10.87□□□□□ -0.67
HSPG2-206ENST00000439717 NNATQ16517 81 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 CYP27C1Q4G0S4 372 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 PDCD4Q53EL6 469 aaKnown RBP10.87□□□□□ -0.67
HSPG2-206ENST00000439717 KRTCAP3Q53RY4 240 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 ANXA8L1Q5VT79 327 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 TMEM81Q6P7N7 255 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 NPSR1Q6W5P4 371 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 TMEM64Q6YI46 380 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 FAM47EQ6ZV65 393 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 SLC44A2Q8IWA5 706 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-206ENST00000439717 PRR22Q8IZ63 422 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 GLB1L3Q8NCI6 653 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-206ENST00000439717 VPS37AQ8NEZ2 397 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 SPPL2AQ8TCT8 520 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 NUDT8Q8WV74 236 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 STON2Q8WXE9 905 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 HOXB13Q92826 284 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-206ENST00000439717 MOAP1Q96BY2 351 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 MS4A4EQ96PG1 132 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 CCDC28BQ9BUN5 200 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 SIRT3Q9NTG7 399 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-206ENST00000439717 DEPPQ9NTK1 212 aa10.87□□□□□ -0.67
HSPG2-206ENST00000439717 CNOT11Q9UKZ1 510 aaKnown RBP10.87□□□□□ -0.67
HSPG2-206ENST00000439717 PRRC2CQ9Y520 2896 aaKnown RBP10.86□□□□□ -0.67
HSPG2-206ENST00000439717 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 PRSS51A0A1B0GVH4 220 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 E9PBE3 544 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 PYCARD-AS1I3L0S3 204 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 ACOT7O00154 380 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 UBDO15205 165 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 POLR3GO15318 223 aaPredicted RBP10.86□□□□□ -0.67
HSPG2-206ENST00000439717 SNX4O95219 450 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 C6orf47O95873 294 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 EFNA1P20827 205 aaPredicted RBP10.86□□□□□ -0.67
HSPG2-206ENST00000439717 GNLYP22749 145 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 MST1P26927 711 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 IDH3AP50213 366 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 PNLIPRP2P54317 469 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 PRKAG1P54619 331 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 WNT3P56703 355 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 UFM1P61960 85 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 MRPS22P82650 360 aaKnown RBP10.86□□□□□ -0.67
HSPG2-206ENST00000439717 LRRC74AQ0VAA2 488 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 EFR3AQ14156 821 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 HYAL4Q2M3T9 481 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 VPS26BQ4G0F5 336 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 OR4F3Q6IEY1 312 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 BHLHB9Q6PI77 547 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 SIAH3Q8IW03 269 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 CDRT4Q8N9R6 151 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 OR5M3Q8NGP4 307 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 SFXN5Q8TD22 340 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 DIO2Q92813 273 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 HGDQ93099 445 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 TMBIM1Q969X1 311 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 TMCO6Q96DC7 493 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 FAM120BQ96EK7 910 aaKnown RBP10.86□□□□□ -0.67
HSPG2-206ENST00000439717 GIMAP5Q96F15 307 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms