RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 MED20Q9H944 212 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 PRDM9Q9NQV7 894 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 ENAMQ9NRM1 1142 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR6C2Q9NZP2 312 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 NCKAP1Q9Y2A7 1128 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 PCDHGA2Q9Y5H1 932 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLC30A4O14863 429 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 C1GALT1C1LP0DN25 315 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 CD9P21926 228 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 ERP29P30040 261 aaKnown RBP9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLC6A12P48065 614 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 CRYBA2P53672 197 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 CXCR4P61073 352 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 SELENOWP63302 87 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 ID2Q02363 134 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 ALKAL2Q6UX46 152 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 FAM92BQ6ZTR7 304 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZNF367Q7RTV3 350 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 HOMEZQ8IX15 550 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR51G2Q8NGK0 314 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 C16orf78Q8WTQ4 265 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 TM9SF4Q92544 642 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 BADQ92934 168 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 TRIM43Q96BQ3 446 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 LRRC3BQ96PB8 259 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 MVB12BQ9H7P6 319 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 ACOXLQ9NUZ1 547 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 EXO1Q9UQ84 846 aaKnown RBP9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 CSNK1G3Q9Y6M4 447 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 PTPRDP23468 1912 aa9.39□□□□□ -0.91
CDC42SE1-202ENST00000439374 SCN3AQ9NY46 2000 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 PDPK1O15530 556 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 MT-ND4P03905 459 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 UCHL1P09936 223 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLC35G4P0C7Q5 338 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 NPPBP16860 134 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 GIFP27352 417 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 GZMKP49863 264 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 WNT3P56703 355 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 UBE2MP61081 183 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 SNTA1Q13424 505 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 HSDL2Q6YN16 418 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 DGLUCYQ7Z3D6 616 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 YAF2Q8IY57 180 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 TRAM1L1Q8N609 369 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 SIMC1Q8NDZ2 872 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR2T35Q8NGX2 323 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 TIFAQ96CG3 184 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 C7orf34Q96L11 122 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 NKX3-1Q99801 234 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZCCHC2Q9C0B9 1178 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLC6A17Q9H1V8 727 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZCCHC3Q9NUD5 404 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 CCDC59Q9P031 241 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 STUB1Q9UNE7 303 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 ING4Q9UNL4 249 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 NTNG1Q9Y2I2 539 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 PLEKHM1Q9Y4G2 1056 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 PCDHGB1Q9Y5G3 927 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 SZT2Q5T011 3432 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 GFYI3L273 518 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 REM1O75628 298 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 C1orf105O95561 183 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR12D1P0DN82 309 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 TALDO1P37837 337 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR10A3P58181 314 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 STXBP1P61764 594 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 DEFA5Q01523 94 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 LASP1Q14847 261 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 ODF4Q2M2E3 257 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 FAM83HQ6ZRV2 1179 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 CCDC116Q8IYX3 515 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZNF433Q8N7K0 673 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 L3MBTL4Q8NA19 623 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZNF566Q969W8 418 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 CCDC32Q9BV29 185 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 ATP13A2Q9NQ11 1180 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 HCN2Q9UL51 889 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 FLVCR2Q9UPI3 526 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 ANGPT4Q9Y264 503 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 GSTK1Q9Y2Q3 226 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 SCN4AP35499 1836 aa9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 TP53BP1Q12888 1972 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-202ENST00000439374 LEUTXA8MZ59 168 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 PRMT3O60678 531 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 APOC3P02656 99 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZNF30P17039 623 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 ATP12AP54707 1039 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 DSTNP60981 165 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 TAP2Q03519 686 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 ANGPT1Q15389 498 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 FBXO43Q4G163 708 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 IRAK1BP1Q5VVH5 260 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLCO4C1Q6ZQN7 724 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 KIAA1958Q8N8K9 716 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR14C36Q8NHC7 312 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZCCHC10Q8TBK6 192 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 ARRDC3Q96B67 414 aa9.37□□□□□ -0.91
CDC42SE1-202ENST00000439374 FNDC11Q9BVV2 318 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms