RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PLOD2O00469 737 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 PDPK1O15530 556 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 ERN1O75460 977 aaKnown RBP22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 SKAP2O75563 359 aaPredicted RBP22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 CLDN1O95832 211 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 IFI6P09912 130 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 PRSS53Q2L4Q9 553 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 BEND6Q5SZJ8 279 aaPredicted RBP22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 R3HCC1LQ7Z5L2 792 aaKnown RBP22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 CD163Q86VB7 1156 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 PACS2Q86VP3 889 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 ZFP28Q8NHY6 868 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 MTERF3Q96E29 417 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 RILPQ96NA2 401 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 ANGPTL4Q9BY76 406 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 ANKRA2Q9H9E1 313 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 FOLH1BQ9HBA9 442 aa22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 DDX18Q9NVP1 670 aaKnown RBP22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 UTP20O75691 2785 aaKnown RBP22.7■■□□□ 1.22
RAPGEF1-206ENST00000438647 ATP6AP2A0A1C7CYW4 349 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 E9PLN8 166 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 ZNHIT1O43257 154 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 SUSD5O60279 629 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 ABCB7O75027 752 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 PEX11AO75192 247 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 TRIM3O75382 744 aaPredicted RBP22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 ATP6AP2O75787 350 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 LRATO95237 230 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 BCKDHAP12694 445 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 KRT20P35900 424 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 MC3RP41968 323 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 MASP1P48740 699 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 SMSP52788 366 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 ABCE1P61221 599 aaKnown RBP22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 TMEM81Q6P7N7 255 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 TMEM107Q6UX40 140 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 ZNF808Q8N4W9 903 aaPredicted RBP22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 ZBTB9Q96C00 473 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 ZBED6CLQ96FA7 236 aaPredicted RBP22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 VKORC1Q9BQB6 163 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 LDAHQ9H6V9 325 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 METTL7AQ9H8H3 244 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 SH3BP4Q9P0V3 963 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 BAIAP2L1Q9UHR4 511 aa22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 C19orf53Q9UNZ5 99 aaPredicted RBP22.69■■□□□ 1.22
RAPGEF1-206ENST00000438647 A0A1B0GVC2 190 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 LRRC3CA6NJW4 275 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 AKAP10O43572 662 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 HCN1O60741 890 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 CT45A8P0DMV1 189 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 CT45A9P0DMV2 189 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 HPCAL1P37235 193 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 RPL3P39023 403 aaKnown RBP22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 CASP3P42574 277 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 ZNF155Q12901 538 aaPredicted RBP22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 PDE7AQ13946 482 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 CT45A2Q5DJT8 189 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 TRILQ7L0X0 811 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 MRGPRGQ86SM5 289 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 OR2L13Q8N349 312 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 FNDC5Q8NAU1 212 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 CLHC1Q8NHS4 586 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 PHF10Q8WUB8 498 aaKnown RBP22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 ITLN2Q8WWU7 325 aaPredicted RBP22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 ELP4Q96EB1 424 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 PHF12Q96QT6 1004 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 TP63Q9H3D4 680 aaPredicted RBP22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 RAP2CQ9Y3L5 183 aa22.68■■□□□ 1.22
RAPGEF1-206ENST00000438647 ZNF407Q9C0G0 2248 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 OR6C70A6NIJ9 312 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 AQP7O14520 342 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 BCKDKO14874 412 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 ITM2AO43736 263 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 LYPLA1O75608 230 aaPredicted RBP22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 REM1O75628 298 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 PRPS2P11908 318 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 GPC1P35052 558 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 MAN2A2P49641 1150 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 SNTA1Q13424 505 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 MPP2Q14168 576 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 C6orf136Q5SQH8 315 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 HHATQ5VTY9 493 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 BICRALQ6AI39 1079 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 XKRXQ6PP77 449 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 HGDQ93099 445 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 TMBIM1Q969X1 311 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 TUBGCP3Q96CW5 907 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 TMCO6Q96DC7 493 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 TMEM41AQ96HV5 264 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 C3orf30Q96M34 536 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 COL21A1Q96P44 957 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 PAIP2Q9BPZ3 127 aaKnown RBP22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 EXO5Q9H790 373 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 ACKR4Q9NPB9 350 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 OR10H1Q9Y4A9 318 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 LIPGQ9Y5X9 500 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 DNAJC13O75165 2243 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 NINQ8N4C6 2090 aa22.67■■□□□ 1.22
RAPGEF1-206ENST00000438647 NBPF19A0A087WUL8 3843 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms