RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 PODNL1Q6PEZ8 512 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 VRK2Q86Y07 508 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 CYP4Z2PQ8N1L4 340 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 FAM83FQ8NEG4 500 aaPredicted RBP8.91□□□□□ -0.98
CUX1-206ENST00000437600 HPS1Q92902 700 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 SLC38A4Q969I6 547 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 CXorf40BQ96DE9 158 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 RNF31Q96EP0 1072 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 ZBED6CLQ96FA7 236 aaPredicted RBP8.91□□□□□ -0.98
CUX1-206ENST00000437600 OR2M4Q96R27 311 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 MAPKAP1Q9BPZ7 522 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 STARD5Q9NSY2 213 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 CNIH4Q9P003 139 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 APOBEC3BQ9UH17 382 aaKnown RBP8.91□□□□□ -0.98
CUX1-206ENST00000437600 TMCC3Q9ULS5 477 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 GPR179Q6PRD1 2367 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 PI4KAP42356 2102 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 OR2W5A6NFC9 320 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 DSCR3O14972 297 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 SLC22A1O15245 554 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 DNAJB5O75953 348 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 IFNA14P01570 189 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 PVRP15151 417 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 SERPINB10P48595 397 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 RGS6P49758 472 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 SIM1P81133 766 aaPredicted RBP8.91□□□□□ -0.98
CUX1-206ENST00000437600 CHRNEQ04844 493 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 INAVAQ3KP66 663 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 CCNJQ5T5M9 372 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 ACSM5Q6NUN0 579 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 Q6ZSR6 202 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 ZER1Q7Z7L7 766 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 IQCHQ86VS3 1027 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 SVOPQ8N4V2 548 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 OR13H1Q8NG92 308 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 OR6Q1Q8NGQ2 317 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 OTULINQ96BN8 352 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 MS4A6EQ96DS6 147 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 SIGLEC11Q96RL6 698 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 MGLLQ99685 303 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 CNPPD1Q9BV87 410 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 GPR174Q9BXC1 333 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 C1QTNF7Q9BXJ2 289 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 EGLN3Q9H6Z9 239 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 IFT52Q9Y366 437 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 HSPE1-MOB4S4R3N1 261 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 FREM2Q5SZK8 3169 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 CPSF4LA6NMK7 179 aaKnown RBP8.9□□□□□ -0.98
CUX1-206ENST00000437600 AIFM1O95831 613 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 S100A1P23297 94 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 CXCR2P25025 360 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 MAOBP27338 520 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 LIMS1P48059 325 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 CDC42P60953 191 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 FZD5Q13467 585 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 DEFB134Q4QY38 66 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 TOR1AIP1Q5JTV8 583 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 ZNF770Q6IQ21 691 aaPredicted RBP8.9□□□□□ -0.98
CUX1-206ENST00000437600 TSSK4Q6SA08 328 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 SLC22A16Q86VW1 577 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 OR2L3Q8NG85 312 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 SUN3Q8TAQ9 357 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 LCN9Q8WX39 176 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 SLC9A6Q92581 669 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 PMM1Q92871 262 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 MYDGFQ969H8 173 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 TOE1Q96GM8 510 aaKnown RBP8.9□□□□□ -0.98
CUX1-206ENST00000437600 PLA2G12AQ9BZM1 189 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 DSN1Q9H410 356 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 MARCH7Q9H992 704 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 HMG20AQ9NP66 347 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 AKIP1Q9NQ31 210 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 PRDM7Q9NQW5 492 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 SLC2A4RGQ9NR83 387 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 ZNF624Q9P2J8 865 aaPredicted RBP8.9□□□□□ -0.98
CUX1-206ENST00000437600 REV1Q9UBZ9 1251 aa8.9□□□□□ -0.98
CUX1-206ENST00000437600 A8MU76 341 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 TLR4O00206 839 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 MAN2B1O00754 1011 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 PRKYO43930 277 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 SEMA4FO95754 770 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 H1F0P07305 194 aaKnown RBP8.9□□□□□ -0.99
CUX1-206ENST00000437600 HIST1H1TP22492 207 aaPredicted RBP8.9□□□□□ -0.99
CUX1-206ENST00000437600 MMP11P24347 488 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 KCNJ5P48544 419 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 KCNC4Q03721 635 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 FUT5Q11128 374 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 TJAP1Q5JTD0 557 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 PRSS41Q7RTY9 318 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 MFSD4AQ8N468 514 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 ZFP41Q8N8Y5 198 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 SLC16A11Q8NCK7 471 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 APOBEC4Q8WW27 367 aaKnown RBP8.9□□□□□ -0.99
CUX1-206ENST00000437600 DACH2Q96NX9 599 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 NECTIN3Q9NQS3 549 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 THSD1Q9NS62 852 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 C14orf119Q9NWQ9 140 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 KLF15Q9UIH9 416 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 MMP17Q9ULZ9 603 aa8.9□□□□□ -0.99
CUX1-206ENST00000437600 A4GNTQ9UNA3 340 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms