RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 EPPINO95925 133 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 EIF2S1P05198 315 aaKnown RBP9.79□□□□□ -0.84
CD44-210ENST00000434472 ASGR2P07307 311 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 CHRM5P08912 532 aaPredicted RBP9.79□□□□□ -0.84
CD44-210ENST00000434472 CCNYL3P0C7X3 344 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 ACP2P11117 423 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 CPEP16870 476 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 CERS1P27544 350 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 PEBP1P30086 187 aaKnown RBP9.79□□□□□ -0.84
CD44-210ENST00000434472 GDI1P31150 447 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 CRYBB2P43320 205 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 MAN2A2P49641 1150 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 BTN3A2P78410 334 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 DECR1Q16698 335 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 MINDY4Q4G0A6 757 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 SOWAHCQ53LP3 525 aaPredicted RBP9.79□□□□□ -0.84
CD44-210ENST00000434472 SYT14P1Q58G82 188 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 C18orf63Q68DL7 685 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 SLC27A4Q6P1M0 643 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 USP30Q70CQ3 517 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 ASPGQ86U10 573 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 CLIP4Q8N3C7 705 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 FBXL6Q8N531 539 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 SETD6Q8TBK2 473 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 ADAMTS15Q8TE58 950 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 CHAC2Q8WUX2 184 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 LCN9Q8WX39 176 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 FGF11Q92914 225 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 TXNDC15Q96J42 360 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 LRR1Q96L50 414 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 ZNF681Q96N22 645 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 SLC6A18Q96N87 628 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 WDFY2Q96P53 400 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 SAP130Q9H0E3 1048 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 SLC38A1Q9H2H9 487 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 PRDM8Q9NQV8 689 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 SPHK1Q9NYA1 384 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 NTMQ9P121 344 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 TESQ9UGI8 421 aaKnown RBP9.79□□□□□ -0.84
CD44-210ENST00000434472 CLEC2DQ9UHP7 191 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 ZNF232Q9UNY5 417 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 PLXND1Q9Y4D7 1925 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 A0A087WUU8 490 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TBC1D3DA0A087WVF3 549 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TBC1D3IA0A087WXS9 549 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TBC1D3EA0A087X179 549 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TBC1D3KA0A087X1G2 549 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 IQCMA0A1B0GVH7 501 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 PRSS38A1L453 326 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 SLC35F4A4IF30 521 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TBC1D3FA6NER0 549 aaPredicted RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 PRR23AA6NEV1 266 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 ANTXRLA6NF34 631 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 KDM4EB2RXH2 506 aaPredicted RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 TBC1D3LB9A6J9 549 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 C4orf51C9J302 202 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 SNPHO15079 494 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TPST2O60704 377 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 PRKRAO75569 313 aaKnown RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 UBXN7O94888 489 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 OR5F1O95221 314 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 IL1AP01583 271 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TSPAN19P0C672 248 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TBC1D3HP0C7X1 549 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 C8orf89P0DMQ9 161 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 ZNF10P21506 573 aaPredicted RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 GTF2E2P29084 291 aaKnown RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 NTSR1P30989 418 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 SOX3P41225 446 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 MC3RP41968 323 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 KIR2DL1P43626 348 aaPredicted RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 TMED10P49755 219 aaKnown RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 SEPHS1P49903 392 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 WNT4P56705 351 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 RAB8AP61006 207 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 BNC1Q01954 994 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 KIR2DS3Q14952 304 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 FAM214AQ32MH5 1076 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TBC1D3GQ6DHY5 549 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TBC1D3CQ6IPX1 549 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 HEPHL1Q6MZM0 1159 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 ACSM5Q6NUN0 579 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 CDC73Q6P1J9 531 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 ZNF730Q6ZMV8 503 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 LAPTM4BQ86VI4 370 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 COMTD1Q86VU5 262 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 PHC2Q8IXK0 858 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 C7orf61Q8IZ16 206 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TBC1D3Q8IZP1 549 aaPredicted RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 LRRC25Q8N386 305 aaPredicted RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 IQCF1Q8N6M8 205 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 CLDN22Q8N7P3 220 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 FAM83FQ8NEG4 500 aaPredicted RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 ACOT11Q8WXI4 607 aaPredicted RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 OSTF1Q92882 214 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 HPS1Q92902 700 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 RFKQ969G6 155 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TMCO6Q96DC7 493 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 C16orf58Q96GQ5 468 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 SERINC2Q96SA4 455 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms