RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 BTAF1O14981 1849 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 KIF13BQ9NQT8 1826 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 MUC6Q6W4X9 2439 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 F8WDY8 70 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 IDH3BO43837 385 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 RALAP11233 206 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 RPA1P27694 616 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 AKT2P31751 481 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 MTIF2P46199 727 aaKnown RBP4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CAMLGP49069 296 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 TKTL1P51854 596 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ZNF131P52739 623 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NLRP11P59045 1033 aaKnown RBP4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 HYAL1Q12794 435 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NME3Q13232 169 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NECTIN1Q15223 517 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 FCN2Q15485 313 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 MRGPRG-AS1Q2M3A8 158 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 LRIT3Q3SXY7 679 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 C2CD6Q53TS8 623 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 OR52B6Q8NGF0 335 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 OR4F5Q8NH21 305 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 PCNPQ8WW12 178 aaKnown RBP4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 TMEM37Q8WXS4 190 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 TAF4BQ92750 862 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 TAF15Q92804 592 aaKnown RBP eCLIP4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NDUFAF3Q9BU61 184 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 OCR1Q9BZK8 76 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ABCG4Q9H172 646 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 UPF3AQ9H1J1 476 aaKnown RBP4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 MOB1AQ9H8S9 216 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 Q9HAA7 133 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 SCRT2Q9NQ03 307 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 POLE3Q9NRF9 147 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 SOHLH2Q9NX45 425 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 THEGQ9P2T0 379 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 MIOXQ9UGB7 285 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 IL20RAQ9UHF4 553 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 BAIAP2L1Q9UHR4 511 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NIP7Q9Y221 180 aaKnown RBP eCLIP4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ATP6V0A2Q9Y487 856 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CENPFP49454 3210 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 KIAA0232Q92628 1395 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ANKRD30BQ9BXX2 1392 aa4.27□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CRYBG1Q9Y4K1 1723 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CCDC88AQ3V6T2 1871 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 KIAA0100Q14667 2235 aaKnown RBP4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CNTNAP2Q9UHC6 1331 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 IGLV4-3A0A075B6K6 122 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 GRID2O43424 1007 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 B4GAT1O43505 415 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ANXA9O76027 345 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 STK17BO94768 372 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CCDC159P0C7I6 412 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 MBL2P11226 248 aaPredicted RBP4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 PGFP49763 221 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 MYBPC1Q00872 1141 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ELAVL2Q12926 359 aaKnown RBP4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 PDZK1IP1Q13113 114 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 TRADDQ15628 312 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 AGKQ53H12 422 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 WDR25Q64LD2 544 aaPredicted RBP4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 METTL7BQ6UX53 244 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 GSG1LQ6UXU4 331 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 GET4Q7L5D6 327 aaPredicted RBP4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NUFIP2Q7Z417 695 aaKnown RBP4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 BNIPLQ7Z465 357 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 AMZ2Q86W34 360 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 FAM131BQ86XD5 332 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 Q8NBF4 154 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 AQP11Q8NBQ7 271 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CHDHQ8NE62 594 aaPredicted RBP4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 OR1K1Q8NGR3 316 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 OR1B1Q8NGR6 318 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 SSC4DQ8WTU2 575 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 COG3Q96JB2 828 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 RCHY1Q96PM5 261 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CPXM1Q96SM3 734 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ATF6BQ99941 703 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 TRIM51Q9BSJ1 452 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 RAB17Q9H0T7 212 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 WDR41Q9HAD4 459 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 PLEKHA3Q9HB20 300 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 FAM212BQ9NTI7 297 aaPredicted RBP4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 DEPPQ9NTK1 212 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CTSZQ9UBR2 303 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 RARRES3Q9UL19 164 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 KLHDC2Q9Y2U9 406 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 BDP1A6H8Y1 2624 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 EYSQ5T1H1 3165 aa4.26□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NRXN1Q9ULB1 1477 aa4.25□□□□□ -1.73
PTP4A1P3-201ENST00000433661 IQGAP3Q86VI3 1631 aa4.25□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ANKRD11Q6UB99 2663 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NPIPA5A0A0B4J1W7 369 aa4.25□□□□□ -1.73
PTP4A1P3-201ENST00000433661 A0A1W2PPR1 153 aa4.25□□□□□ -1.73
PTP4A1P3-201ENST00000433661 RNF212BA8MTL3 300 aa4.25□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NPIPA5E9PKD4 350 aa4.25□□□□□ -1.73
PTP4A1P3-201ENST00000433661 SH2D1BO14796 132 aa4.25□□□□□ -1.73
PTP4A1P3-201ENST00000433661 DUS4LO95620 317 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms