RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 RAB40BQ12829 278 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 RIN1Q13671 783 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 GRB14Q14449 540 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 ADGRF1Q5T601 910 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 SFRP4Q6FHJ7 346 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 CRTC1Q6UUV9 634 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 C2orf73Q8N5S3 287 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 OR8D4Q8NGM9 314 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 TEX47Q8TBZ9 253 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 WFDC5Q8TCV5 224 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 SLC16A10Q8TF71 515 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 NEIL2Q969S2 332 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 UROC1Q96N76 676 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 FCRL4Q96PJ5 515 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 RSPO3Q9BXY4 272 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 CNIH4Q9P003 139 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 TRPC4Q9UBN4 977 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 CCL15-CCL14A0A0B4J2E2 113 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 A0A1W2PPK0 400 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 hCG_1807616A0A1W2PRN6 198 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 TCRBV16S1A1N1A0A5B0 115 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 ARHGEF33A8MVX0 844 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 PRODHO43272 600 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 STC2O76061 302 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 NTN1O95631 604 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 FURINP09958 794 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 NAT2P11245 290 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 SLC6A11P48066 632 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 MANFP55145 182 aaKnown RBP10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 CCL15Q16663 113 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 ARHGAP15Q53QZ3 475 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 CD276Q5ZPR3 534 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 SLC36A4Q6YBV0 504 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 NR2C2APQ86WQ0 139 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 SIAH3Q8IW03 269 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 ZNF687Q8N1G0 1237 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 C16orf78Q8WTQ4 265 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 SCAMP4Q969E2 229 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 CXorf58Q96LI9 332 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 DDOQ99489 341 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 DLL4Q9NR61 685 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 KCND3Q9UK17 655 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 BRWD3Q6RI45 1802 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 TMEM129A0AVI4 362 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 SRPRAP08240 638 aaKnown RBP10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 H2AFB2P0C5Z0 115 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 PCSK2P16519 638 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 CFL1P23528 166 aaKnown RBP10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 SELENOPP49908 381 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 AP1S2P56377 157 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 TLE2Q04725 743 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 GRIN2CQ14957 1233 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 TAF12Q16514 161 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 SYTL3Q4VX76 610 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 GRHL2Q6ISB3 625 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 MED27Q6P2C8 311 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 ALKAL2Q6UX46 152 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 RSPO2Q6UXX9 243 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 ESPNLQ6ZVH7 1005 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 TRPV1Q8NER1 839 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 SFXN2Q96NB2 322 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 SYT17Q9BSW7 474 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 KCNK12Q9HB15 430 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 KCMF1Q9P0J7 381 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 FLVCR2Q9UPI3 526 aa10.9□□□□□ -0.66
HMGCS1-202ENST00000433297 ARRDC5A6NEK1 342 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC38A8A6NNN8 435 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 SIGLEC5O15389 551 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF623O75123 536 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 HPXP02790 462 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 ATP1B2P14415 290 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 PTGER1P34995 402 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 BTCP35070 178 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 BUD31P41223 144 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 BLVRAP53004 296 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 SIGLEC14Q08ET2 396 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 OPCMLQ14982 345 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 CDKL4Q5MAI5 379 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC30A6Q6NXT4 461 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 C17orf107Q6ZR85 190 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 RRM2BQ7LG56 351 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 MOSPD2Q8NHP6 518 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 HMGB4Q8WW32 186 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 OR2M2Q96R28 347 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 GPR62Q9BZJ7 368 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 ISG20L2Q9H9L3 353 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 EXOSC1Q9Y3B2 195 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 HRH3Q9Y5N1 445 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 FKBP7Q9Y680 259 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 PRR23D1E9PI22 279 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 H0YIV9 168 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 KDM4BO94953 1096 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 URODP06132 367 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 PRR23D2P0DMB1 279 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 HSD3B1P14060 373 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 POU3F2P20265 443 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 TPMTP51580 245 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 PRKAG1P54619 331 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 ELOAQ14241 798 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 SLBPQ14493 270 aaKnown RBP eCLIP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms