RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 PODNL1Q6PEZ8 512 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 Q6ZVL8 140 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 ZNF765Q7L2R6 523 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 GHDCQ8N2G8 530 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 OR4K5Q8NGD3 323 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 SLC7A13Q8TCU3 470 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 SFXN5Q8TD22 340 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 CXorf40AQ8TE69 158 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 FGF11Q92914 225 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 OTUB1Q96FW1 271 aaPredicted RBP13.93□□□□□ -0.18
DDX56-205ENST00000433257 SLC35G5Q96KT7 338 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 SLC22A12Q96S37 553 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 AIF1LQ9BQI0 150 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 UBE2ZQ9H832 354 aaPredicted RBP13.93□□□□□ -0.18
DDX56-205ENST00000433257 KRCC1Q9NPI7 259 aaPredicted RBP13.93□□□□□ -0.18
DDX56-205ENST00000433257 A4GNTQ9UNA3 340 aa13.93□□□□□ -0.18
DDX56-205ENST00000433257 ANHXE9PGG2 379 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 CPNE3O75131 537 aaKnown RBP13.92□□□□□ -0.18
DDX56-205ENST00000433257 MTX2O75431 263 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 DRD2P14416 443 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 CTSOP43234 321 aaPredicted RBP13.92□□□□□ -0.18
DDX56-205ENST00000433257 OR3A3P47888 321 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 PREPP48147 710 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 CASP9P55211 416 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 PCBP4P57723 403 aaKnown RBP13.92□□□□□ -0.18
DDX56-205ENST00000433257 TAP2Q03519 686 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 CYP27C1Q4G0S4 372 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 ESCO2Q56NI9 601 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 KHDRBS2Q5VWX1 349 aaKnown RBP13.92□□□□□ -0.18
DDX56-205ENST00000433257 ANKRD54Q6NXT1 300 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 TMEM64Q6YI46 380 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 RASSF6Q6ZTQ3 369 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 RTL10Q7L3V2 364 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 PDZD3Q86UT5 571 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 NUDT13Q86X67 352 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 POGLUT1Q8NBL1 392 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 VN1R2Q8NFZ6 395 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 OR52P1PQ8NH57 321 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 SUN3Q8TAQ9 357 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 BHMTQ93088 406 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 SCAMP4Q969E2 229 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 RAD51AP1Q96B01 352 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 PINK1Q9BXM7 581 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 ZNF717Q9BY31 904 aaPredicted RBP13.92□□□□□ -0.18
DDX56-205ENST00000433257 PLSCR3Q9NRY6 295 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 CALML5Q9NZT1 146 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 COPZ2Q9P299 210 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 CLCA2Q9UQC9 943 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 LIPT1Q9Y234 373 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 RNF215Q9Y6U7 377 aa13.92□□□□□ -0.18
DDX56-205ENST00000433257 A0A0G2JPF8 293 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 LINC00854A0A1B0GVQ3 168 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 HNRNPCL2B2RXH8 293 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 HNRNPCL3B7ZW38 293 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 INMT-MINDY4F8WBC2 141 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 HMGN4O00479 90 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 SH3BGRLO75368 114 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 SOD1P00441 154 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 C8AP07357 584 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 FAM157BP0CG42 384 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 HNRNPCL4P0DMR1 293 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 PEPDP12955 493 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 ARSBP15848 533 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 HK1P19367 917 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 LTBRP36941 435 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 FEN1P39748 380 aaKnown RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 CCT3P49368 545 aaKnown RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 RPS25P62851 125 aaKnown RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 DLX2Q07687 328 aaPredicted RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 TSPAN31Q12999 210 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 CCSMST1Q4G0I0 132 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 ZNF658BQ4V348 819 aaPredicted RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 ZNF648Q5T619 568 aaPredicted RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 TYW3Q6IPR3 259 aaKnown RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 ADNP2Q6IQ32 1131 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 TNFAIP8L2Q6P589 184 aaPredicted RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 OR2A12Q8NGT7 310 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 TM9SF4Q92544 642 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 OSTF1Q92882 214 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 ATF6BQ99941 703 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.91□□□□□ -0.18
DDX56-205ENST00000433257 SFXN1Q9H9B4 322 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 ZNF334Q9HCZ1 680 aaPredicted RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 CLEC1BQ9P126 229 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 FBXW2Q9UKT8 454 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 GPR34Q9UPC5 381 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 EXOGQ9Y2C4 368 aaKnown RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 XIRP2A4UGR9 3374 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 REV3LO60673 3130 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 COL6A3P12111 3177 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 A0A0B4J293 547 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 LEFTY2O00292 366 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 WWP2O00308 870 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 SHOXO15266 292 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 RFPL3O75679 317 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 UBXN7O94888 489 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 KLHL18O94889 574 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 FGF19O95750 216 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 HMGN1P05114 100 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 ELFN1P0C7U0 828 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms