RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 ODF2LQ9ULJ1 636 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 FKBP7Q9Y680 259 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 TEX264Q9Y6I9 313 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 SALL1Q9NSC2 1324 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 A0A087WWV3 80 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 BICDL2A1A5D9 508 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 LGALS8O00214 317 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 VEGFDO43915 354 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 RHBDL1O75783 438 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 BCAS2O75934 225 aaPredicted RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 CXCL14O95715 111 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 MT-ATP6P00846 226 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 PIGRP01833 764 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 HMOX1P09601 288 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 HOXB7P09629 217 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 CT45A10P0DMU9 189 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 UQCRBP14927 111 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 B4GALT1P15291 398 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 CAPN2P17655 700 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 TNNI3P19429 210 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 PSMA2P25787 234 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 DPP4P27487 766 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 AXLP30530 894 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 PRKAR2BP31323 418 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 SAA4P35542 130 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 RPL4P36578 427 aaKnown RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 PITPNBP48739 271 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 HMGCS2P54868 508 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 ADARP55265 1226 aaKnown RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 ERVPABLB-1P60509 514 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 SRYQ05066 204 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 CD300CQ08708 224 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 CD47Q08722 323 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 BTG3Q14201 252 aaPredicted RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 ABRAXAS2Q15018 415 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 CAMK4Q16566 473 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 CLPPQ16740 277 aaPredicted RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 EIPR1Q53HC9 387 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 CMPK2Q5EBM0 449 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 ACER2Q5QJU3 275 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 LGSNQ5TDP6 509 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 WDR25Q64LD2 544 aaPredicted RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 RFWD3Q6PCD5 774 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 ARSKQ6UWY0 536 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 TIPARPQ7Z3E1 657 aaKnown RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 NET1Q7Z628 596 aaPredicted RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 WDR49Q8IV35 697 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 ZBED8Q8IZ13 594 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 FAM9BQ8IZU0 186 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 CENPSQ8N2Z9 138 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 RNF148Q8N7C7 305 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 ARL10Q8N8L6 244 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 OR8H1Q8NGG4 311 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 OR56B1Q8NGI3 324 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 OR4Q3Q8NH05 313 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 WDR36Q8NI36 951 aaKnown RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 P3H4Q92791 437 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 DLX4Q92988 240 aaPredicted RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 LHX4Q969G2 390 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 NTNG2Q96CW9 530 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 SERAC1Q96JX3 654 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 SIGLEC12Q96PQ1 595 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 FAM111AQ96PZ2 611 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 FICDQ9BVA6 458 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 CARD6Q9BX69 1037 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 XPO4Q9C0E2 1151 aaKnown RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 ELOVL4Q9GZR5 314 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 RAB17Q9H0T7 212 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 OPN3Q9H1Y3 402 aaPredicted RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 NRN1Q9NPD7 142 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 STARD5Q9NSY2 213 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 EHFQ9NZC4 300 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 ANKMY1Q9P2S6 941 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 PLA2G4CQ9UP65 541 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 RNF6Q9Y252 685 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 PLEKHA6Q9Y2H5 1048 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 RPH3AQ9Y2J0 694 aaPredicted RBP1.66□□□□□ -2.14
CDC40-204ENST00000431461 GPRASP1Q5JY77 1395 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 POGZQ7Z3K3 1410 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 KIF7Q2M1P5 1343 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 RPGRIP1LQ68CZ1 1315 aa1.66□□□□□ -2.14
CDC40-204ENST00000431461 FAM230AA0A1W2PPH8 454 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 ZSCAN5CA6NGD5 496 aaPredicted RBP1.65□□□□□ -2.15
CDC40-204ENST00000431461 CCDC69A6NI79 296 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 RPL37AP8A6NKH3 93 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 EFCAB7A8K855 629 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 ALOX15BO15296 676 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 CLDN3O15551 220 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 GPAA1O43292 621 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 LRRTM2O43300 516 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 LRP3O75074 770 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 TRIM3O75382 744 aaPredicted RBP1.65□□□□□ -2.15
CDC40-204ENST00000431461 MFN2O95140 757 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 SEMA4FO95754 770 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 IGSF6O95976 241 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 SLC4A1P02730 911 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 PROS1P07225 676 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 RRASP10301 218 aa1.65□□□□□ -2.15
CDC40-204ENST00000431461 PGAM2P15259 253 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms