RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 MAP10Q9P2G4 905 aa23.18■■□□□ 1.3
CPNE1-212ENST00000430570 NPFFR2Q9Y5X5 522 aa23.18■■□□□ 1.3
CPNE1-212ENST00000430570 FRG2CA6NGY1 282 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 SLC25A12O75746 678 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 FBXO45P0C2W1 286 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 LSP1P33241 339 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 CCT3P49368 545 aaKnown RBP23.17■■□□□ 1.3
CPNE1-212ENST00000430570 ATP4BP51164 291 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 POLR2JP52435 117 aaKnown RBP23.17■■□□□ 1.3
CPNE1-212ENST00000430570 GPALPP1Q8IXQ4 340 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 OR4N2Q8NGD1 307 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 OR4A15Q8NGL6 344 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 OR5AK3PQ8NH89 298 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 SPACA9Q96E40 222 aaPredicted RBP23.17■■□□□ 1.3
CPNE1-212ENST00000430570 HSPBAP1Q96EW2 488 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 INPP5KQ9BT40 448 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 ZNF385DQ9H6B1 395 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 NEUROD4Q9HD90 331 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 ZCCHC3Q9NUD5 404 aaKnown RBP23.17■■□□□ 1.3
CPNE1-212ENST00000430570 KLHL14Q9P2G3 628 aa23.17■■□□□ 1.3
CPNE1-212ENST00000430570 TO15178 435 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 IL6P05231 212 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 CD46P15529 392 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 ABCD3P28288 659 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 GNGT1P63211 74 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 SQLEQ14534 574 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 MAPKAPK3Q16644 382 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 PRR30Q53SZ7 412 aaPredicted RBP23.16■■□□□ 1.3
CPNE1-212ENST00000430570 DESI1Q6ICB0 168 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 GALNTL5Q7Z4T8 443 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 SLC44A2Q8IWA5 706 aaPredicted RBP23.16■■□□□ 1.3
CPNE1-212ENST00000430570 HORMAD2Q8N7B1 307 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 VPS37AQ8NEZ2 397 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 C5orf34Q96MH7 638 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 YIPF4Q9BSR8 244 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 LMF2Q9BU23 707 aaKnown RBP23.16■■□□□ 1.3
CPNE1-212ENST00000430570 BTNL2Q9UIR0 455 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 SPTA1P02549 2419 aa23.16■■□□□ 1.3
CPNE1-212ENST00000430570 FAM234BA2RU67 622 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 SOAT1P35610 550 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 MAP3K8P41279 467 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 MLLT10P55197 1068 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 NRG3P56975 720 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 FBXW4P57775 412 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 PRR5P85299 388 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 GAB1Q13480 694 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 SPDYE7PQ495Y7 208 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 RTL4Q6ZR62 310 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 CISD2Q8N5K1 135 aaKnown RBP23.15■■□□□ 1.3
CPNE1-212ENST00000430570 OR5M3Q8NGP4 307 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 C10orf82Q8WW14 230 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 HOXB13Q92826 284 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-212ENST00000430570 VPS33AQ96AX1 596 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 OMA1Q96E52 524 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 CCDC115Q96NT0 180 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 MS4A4EQ96PG1 132 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 EPN3Q9H201 632 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 CCDC167Q9P0B6 97 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 PCDHGB4Q9UN71 923 aa23.15■■□□□ 1.3
CPNE1-212ENST00000430570 TTLL8A6PVC2 850 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 ACOX3O15254 700 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 NME2P1O60361 137 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 HMGN2P05204 90 aaKnown RBP23.14■■□□□ 1.3
CPNE1-212ENST00000430570 ACP2P11117 423 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 NME2P22392 152 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 CDKN2CP42773 168 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 NTRK2Q16620 822 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 AGKQ53H12 422 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 EXOSC6Q5RKV6 272 aaKnown RBP23.14■■□□□ 1.3
CPNE1-212ENST00000430570 METTL21CQ5VZV1 264 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 MFSD12Q6NUT3 480 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 RPUSD3Q6P087 351 aaKnown RBP23.14■■□□□ 1.3
CPNE1-212ENST00000430570 PSD4Q8NDX1 1056 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 OR10G3Q8NGC4 313 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 FBXO30Q8TB52 745 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 SFXN5Q8TD22 340 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 TMBIM1Q969X1 311 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 TMEM125Q96AQ2 219 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 OTUB1Q96FW1 271 aaPredicted RBP23.14■■□□□ 1.3
CPNE1-212ENST00000430570 SH2D2AQ9NP31 389 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 SERHLQ9NQF3 203 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 GPATCH2Q9NW75 528 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 TRIM33Q9UPN9 1127 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 NTNG1Q9Y2I2 539 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 PCDHGB6Q9Y5F9 930 aa23.14■■□□□ 1.3
CPNE1-212ENST00000430570 EML6Q6ZMW3 1958 aa23.14■■□□□ 1.29
CPNE1-212ENST00000430570 C1QCP02747 245 aa23.13■■□□□ 1.29
CPNE1-212ENST00000430570 CCL3P10147 92 aa23.13■■□□□ 1.29
CPNE1-212ENST00000430570 GABRA3P34903 492 aa23.13■■□□□ 1.29
CPNE1-212ENST00000430570 PLCXD2Q0VAA5 305 aa23.13■■□□□ 1.29
CPNE1-212ENST00000430570 TP53BP2Q13625 1128 aa23.13■■□□□ 1.29
CPNE1-212ENST00000430570 LASP1Q14847 261 aaKnown RBP23.13■■□□□ 1.29
CPNE1-212ENST00000430570 TIGD2Q4W5G0 525 aa23.13■■□□□ 1.29
CPNE1-212ENST00000430570 BLOC1S3Q6QNY0 202 aa23.13■■□□□ 1.29
CPNE1-212ENST00000430570 SLC34A3Q8N130 599 aa23.13■■□□□ 1.29
CPNE1-212ENST00000430570 TMEM178AQ8NBL3 297 aa23.13■■□□□ 1.29
CPNE1-212ENST00000430570 SLC16A11Q8NCK7 471 aa23.13■■□□□ 1.29
CPNE1-212ENST00000430570 FAM13CQ8NE31 585 aa23.13■■□□□ 1.29
CPNE1-212ENST00000430570 OR56A1Q8NGH5 318 aa23.13■■□□□ 1.29
CPNE1-212ENST00000430570 GOT1L1Q8NHS2 421 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms