RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 PRAMEF25A6NGN4 478 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 OR6C70A6NIJ9 312 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 A8MT66 165 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 UGT2B11O75310 529 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 ERN1O75460 977 aaKnown RBP13.56□□□□□ -0.24
MSH5-208ENST00000429846 RAF1P04049 648 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 TMIGD3P0DMS9 266 aaPredicted RBP13.56□□□□□ -0.24
MSH5-208ENST00000429846 EMDP50402 254 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 DGKQP52824 942 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 CSTF3Q12996 717 aaKnown RBP13.56□□□□□ -0.24
MSH5-208ENST00000429846 RASA2Q15283 850 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 UBAP2Q5T6F2 1119 aaKnown RBP13.56□□□□□ -0.24
MSH5-208ENST00000429846 FBXW10Q5XX13 1052 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 ADGRE4PQ86SQ3 457 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 YRDCQ86U90 279 aaKnown RBP13.56□□□□□ -0.24
MSH5-208ENST00000429846 C1orf52Q8N6N3 182 aaKnown RBP13.56□□□□□ -0.24
MSH5-208ENST00000429846 GBP7Q8N8V2 638 aaPredicted RBP13.56□□□□□ -0.24
MSH5-208ENST00000429846 OR52R1Q8NGF1 315 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 OR14L1PQ8NHC6 308 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 CNRIP1Q96F85 164 aaPredicted RBP13.56□□□□□ -0.24
MSH5-208ENST00000429846 SLC35A4Q96G79 324 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 POM121Q96HA1 1249 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 ZNF681Q96N22 645 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 UCN2Q96RP3 112 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 FMO2Q99518 471 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 SHCBP1LQ9BZQ2 653 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 EPB41L4BQ9H329 900 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 GALNT9Q9HCQ5 603 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 VPS29Q9UBQ0 182 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 MCM8Q9UJA3 840 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 UTS2RQ9UKP6 389 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 MAPRE3Q9UPY8 281 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 MED12Q93074 2177 aa13.56□□□□□ -0.24
MSH5-208ENST00000429846 TRIM49D1C9J1S8 452 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 H0Y3Z8 333 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 KRT6AP02538 564 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 KRT6BP04259 564 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 CHMP24386 653 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 SRD5A2P31213 254 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 SOX18P35713 384 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 KRT6CP48668 564 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 ALDH9A1P49189 494 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 CDH13P55290 713 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 EEF1A1P68104 462 aaKnown RBP13.55□□□□□ -0.24
MSH5-208ENST00000429846 TRMT12Q53H54 448 aaKnown RBP13.55□□□□□ -0.24
MSH5-208ENST00000429846 EEF1A1P5Q5VTE0 462 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 IFNEQ86WN2 208 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 MMP21Q8N119 569 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 WDSUB1Q8N9V3 476 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 C9orf106Q8NAJ2 232 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 ADCY4Q8NFM4 1077 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 COL21A1Q96P44 957 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 BTBD9Q96Q07 612 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 ZNF225Q9UK10 706 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 NFU1Q9UMS0 254 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 GPR55Q9Y2T6 319 aaPredicted RBP13.55□□□□□ -0.24
MSH5-208ENST00000429846 WIF1Q9Y5W5 379 aa13.55□□□□□ -0.24
MSH5-208ENST00000429846 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
MSH5-208ENST00000429846 ACANP16112 2415 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 FLNAP21333 2647 aaKnown RBP13.54□□□□□ -0.24
MSH5-208ENST00000429846 PPP6CO00743 305 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 DIAPH2O60879 1101 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 OR4F21O95013 312 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 RCBTB2O95199 551 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 ESRRBO95718 433 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 DRD2P14416 443 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 FOSL1P15407 271 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 PCSK2P16519 638 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 TAC1P20366 129 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 GSTM5P46439 218 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 GFRA1P56159 465 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 MRPS35P82673 323 aaKnown RBP13.54□□□□□ -0.24
MSH5-208ENST00000429846 HMGCS1Q01581 520 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 CLCQ05315 142 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 DUSP2Q05923 314 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 GAB1Q13480 694 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 KEAP1Q14145 624 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 EFR3AQ14156 821 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 LTB4RQ15722 352 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 WHAMMP3Q1A5X7 153 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 ERCC6LQ2NKX8 1250 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 SPIN4Q56A73 249 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 ZNF628Q5EBL2 1059 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 LGSNQ5TDP6 509 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 AAGABQ6PD74 315 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 RPS27LQ71UM5 84 aaKnown RBP13.54□□□□□ -0.24
MSH5-208ENST00000429846 LCA5Q86VQ0 697 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 PLCZ1Q86YW0 608 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 C17orf53Q8N3J3 647 aaPredicted RBP13.54□□□□□ -0.24
MSH5-208ENST00000429846 DCAKDQ8WVC6 231 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 WNT2BQ93097 391 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 TMBIM1Q969X1 311 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 ZNF382Q96SR6 550 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 TUBA1CQ9BQE3 449 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 YIPF4Q9BSR8 244 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 RBM24Q9BX46 236 aaKnown RBP13.54□□□□□ -0.24
MSH5-208ENST00000429846 PIGMQ9H3S5 423 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 SERHLQ9NQF3 203 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 PFDN4Q9NQP4 134 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 EHD3Q9NZN3 535 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms