RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SUSD1Q6UWL2 747 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 UNC5DQ6UXZ4 953 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF720Q7Z2F6 126 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 MAATS1Q7Z4T9 603 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 CACUL1Q86Y37 369 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 SYCP3Q8IZU3 236 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 TRIML2Q8N7C3 387 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 MAPKAPK5-AS1Q8N8E1 139 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 OR4C6Q8NH72 309 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 WDR36Q8NI36 951 aaKnown RBP4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 MAPK15Q8TD08 544 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 CFAP36Q96G28 342 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 PIWIL1Q96J94 861 aaKnown RBP4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 SERAC1Q96JX3 654 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 C8orf76Q96K31 380 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 AK8Q96MA6 479 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 OR6C1Q96RD1 312 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 KCNK16Q96T55 309 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 OMDQ99983 421 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 MED10Q9BTT4 135 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 ADNPQ9H2P0 1102 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 TMEM245Q9H330 911 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 DMAP1Q9NPF5 467 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 MRGBPQ9NV56 204 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 IL20Q9NYY1 176 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 ANAPC2Q9UJX6 822 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 TTLL3Q9Y4R7 772 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 ITPR2Q14571 2701 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 DOCK9Q9BZ29 2069 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 UTP20O75691 2785 aaKnown RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 RP1L1Q8IWN7 2480 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 A0A087X0M5 115 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 A0A1B0GX30 115 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF233A6NK53 670 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 PP2D1A8MPX8 630 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 CDRT15L2A8MXV6 281 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 GAPDHSO14556 408 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 CASQ2O14958 399 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 HCRTO43612 131 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 KHDRBS3O75525 346 aaKnown RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 TNFSF15O95150 251 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 YEATS4O95619 227 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 GPIP06744 558 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 TRIM49P0CI25 452 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 TRIM49CP0CI26 452 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 MMP9P14780 707 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 EZRP15311 586 aaKnown RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 POLR2EP19388 210 aaKnown RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 CD9P21926 228 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 SLC8A3P57103 927 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 B3GALT5-AS1P59052 145 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 BASP1P80723 227 aaKnown RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 DR1Q01658 176 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 PPIDQ08752 370 aaKnown RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 EIF3IQ13347 325 aaKnown RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 CUL3Q13618 768 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 ALCAMQ13740 583 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 UGP2Q16851 508 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 FASTKD1Q53R41 847 aaKnown RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 C10orf120Q5SQS8 335 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 CLEC18BQ6UXF7 455 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 NLRP9Q7RTR0 991 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 GPBP1Q86WP2 473 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 WDR49Q8IV35 697 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 CCDC170Q8IYT3 715 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 GPD1LQ8N335 351 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 RNF10Q8N5U6 811 aaKnown RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 TEX9Q8N6V9 391 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 LINC00469Q8N7U9 141 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 NEK11Q8NG66 645 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 DYRK2Q92630 601 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 ALS2CR12Q96Q35 445 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 ACCSQ96QU6 501 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF300Q96RE9 604 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 PLIN2Q99541 437 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 MRPL45Q9BRJ2 306 aaKnown RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 FUCA2Q9BTY2 467 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 MTMR12Q9C0I1 747 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 NEUROG2Q9H2A3 272 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 PPIL3Q9H2H8 161 aaKnown RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 HRH4Q9H3N8 390 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZSCAN16Q9H4T2 348 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 FANCFQ9NPI8 374 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 PRSS16Q9NQE7 514 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 SDR39U1Q9NRG7 319 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 SLC7A10Q9NS82 523 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 NLGN3Q9NZ94 848 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 AIPL1Q9NZN9 384 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZDHHC2Q9UIJ5 367 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 SCML2Q9UQR0 700 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 ANKRD17O75179 2603 aaKnown RBP4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 C2CD3Q4AC94 2353 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 LRRK1Q38SD2 2015 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 PCNX3Q9H6A9 2034 aa4.11□□□□□ -1.75
HMGB3P5-201ENST00000428894 RP1P56715 2156 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 SERINC4A6NH21 518 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 MSGN1A6NI15 193 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 PRAMEF26H0Y7S4 382 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 CLDN5O00501 218 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 NDC80O14777 642 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms