RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 GBX1Q14549 363 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 MARCH9Q86YJ5 346 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 ZCCHC7Q8N3Z6 543 aaKnown RBP10.32□□□□□ -0.76
HIPK2-203ENST00000428878 TCEANCQ8N8B7 351 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 TMEM52Q8NDY8 209 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 OR56A1Q8NGH5 318 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 SLC38A4Q969I6 547 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 TBC1D20Q96BZ9 403 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 FAM46AQ96IP4 442 aaKnown RBP10.32□□□□□ -0.76
HIPK2-203ENST00000428878 CCDC115Q96NT0 180 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 FOXN4Q96NZ1 517 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 SEMA6CQ9H3T2 930 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 CLK4Q9HAZ1 481 aaKnown RBP10.32□□□□□ -0.76
HIPK2-203ENST00000428878 PNPLA3Q9NST1 481 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 SCN8AQ9UQD0 1980 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 LMO7DNF2Z398 122 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 H3BSA7 217 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 SCRG1O75711 98 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 LINGO3P0C6S8 592 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 PEPDP12955 493 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 BMP7P18075 431 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 CD1CP29017 333 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 AHRP35869 848 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 EEF1A2Q05639 463 aaKnown RBP10.32□□□□□ -0.76
HIPK2-203ENST00000428878 ATP6AP1Q15904 470 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 PDZK1Q5T2W1 519 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 SPATC1Q76KD6 591 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 LAPTM4BQ86VI4 370 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 PAQR7Q86WK9 346 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 TMEM102Q8N9M5 508 aaPredicted RBP10.32□□□□□ -0.76
HIPK2-203ENST00000428878 HSPBAP1Q96EW2 488 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 CRB3Q9BUF7 120 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 TEX12Q9BXU0 123 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 LYARQ9NX58 379 aaKnown RBP10.32□□□□□ -0.76
HIPK2-203ENST00000428878 CTSFQ9UBX1 484 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 CEP295Q9C0D2 2601 aa10.32□□□□□ -0.76
HIPK2-203ENST00000428878 TECTAO75443 2155 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 C11orf98E9PRG8 122 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 KCNJ13O60928 360 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 GPR75O95800 540 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 MAP2K4P45985 399 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 BIKQ13323 160 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 ENPP2Q13822 863 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 AGERQ15109 404 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 DUSP5Q16690 384 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 OGFRL1Q5TC84 451 aaPredicted RBP10.31□□□□□ -0.76
HIPK2-203ENST00000428878 DESI1Q6ICB0 168 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 SLC48A1Q6P1K1 146 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 UTS2BQ765I0 119 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 TMPRSS9Q7Z410 1059 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 IL22RA1Q8N6P7 574 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 RORBQ92753 470 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 OR2A5Q96R48 311 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 VNN3Q9NY84 501 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 PDP2Q9P2J9 529 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 VDAC3Q9Y277 283 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 AP3M1Q9Y2T2 418 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 C2orf16Q68DN1 1984 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 KLHL33A6NCF5 533 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 A8MVJ9 347 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 M0R3G1 203 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 CSTAP01040 98 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 IFI30P13284 250 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 PIGAP37287 484 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 CAPZBP47756 277 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 CDC42P60953 191 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 LSM11P83369 360 aaKnown RBP eCLIP10.31□□□□□ -0.76
HIPK2-203ENST00000428878 C3orf38Q5JPI3 329 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 METTL2BQ6P1Q9 378 aaKnown RBP10.31□□□□□ -0.76
HIPK2-203ENST00000428878 PTOV1Q86YD1 416 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 CYB561A3Q8NBI2 242 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 GPBAR1Q8TDU6 330 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 ABTB1Q969K4 478 aaPredicted RBP10.31□□□□□ -0.76
HIPK2-203ENST00000428878 ELP4Q96EB1 424 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 MPP4Q96JB8 637 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 TMEM27Q9HBJ8 222 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 PCNX1Q96RV3 2341 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 TRBV4-1A0A0J9YWV2 114 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 SNRNP200O75643 2136 aaKnown RBP10.31□□□□□ -0.76
HIPK2-203ENST00000428878 CKMT1AP12532 417 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 SELENOWP63302 87 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 RPP38P78345 283 aaKnown RBP10.31□□□□□ -0.76
HIPK2-203ENST00000428878 TNFRSF17Q02223 184 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 GNA13Q14344 377 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 NADK2Q4G0N4 442 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 KCTD8Q6ZWB6 473 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 SLC25A45Q8N413 288 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 FAM98AQ8NCA5 519 aaKnown RBP10.31□□□□□ -0.76
HIPK2-203ENST00000428878 NLGN4YQ8NFZ3 816 aaPredicted RBP10.31□□□□□ -0.76
HIPK2-203ENST00000428878 TEX47Q8TBZ9 253 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 NR1H4Q96RI1 486 aaPredicted RBP10.31□□□□□ -0.76
HIPK2-203ENST00000428878 IFT27Q9BW83 186 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 ZNF304Q9HCX3 659 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 AGPAT4Q9NRZ5 378 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 USE1Q9NZ43 259 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 KLRF1Q9NZS2 232 aa10.31□□□□□ -0.76
HIPK2-203ENST00000428878 RPH3AQ9Y2J0 694 aaPredicted RBP10.31□□□□□ -0.76
HIPK2-203ENST00000428878 ICE1Q9Y2F5 2266 aa10.3□□□□□ -0.76
HIPK2-203ENST00000428878 SEMA3DO95025 777 aa10.3□□□□□ -0.76
HIPK2-203ENST00000428878 PLGP00747 810 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms