RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 VPS26BQ4G0F5 336 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 ATP6AP1LQ52LC2 224 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 RFTN2Q52LD8 501 aaPredicted RBP8.4□□□□□ -1.06
SMC1A-203ENST00000428014 EXOSC6Q5RKV6 272 aaKnown RBP8.4□□□□□ -1.06
SMC1A-203ENST00000428014 C6orf136Q5SQH8 315 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 SCIMPQ6UWF3 145 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 TMEM64Q6YI46 380 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 FAM47EQ6ZV65 393 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 MAMDC2Q7Z304 686 aaPredicted RBP8.4□□□□□ -1.06
SMC1A-203ENST00000428014 TICAM1Q8IUC6 712 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 MOAP1Q96BY2 351 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 SARAFQ96BY9 339 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 COQ8BQ96D53 544 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 TMCO6Q96DC7 493 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 ZNF597Q96LX8 424 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 AMDHD1Q96NU7 426 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 BBS4Q96RK4 519 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 HBEGFQ99075 208 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 LMF2Q9BU23 707 aaKnown RBP8.4□□□□□ -1.06
SMC1A-203ENST00000428014 HES7Q9BYE0 225 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 TTTY12Q9BZ98 90 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 UBQLN3Q9H347 655 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 TP63Q9H3D4 680 aaPredicted RBP8.4□□□□□ -1.06
SMC1A-203ENST00000428014 ZNF703Q9H7S9 590 aaPredicted RBP8.4□□□□□ -1.06
SMC1A-203ENST00000428014 C3orf14Q9HBI5 128 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 PROK2Q9HC23 129 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 TNFRSF12AQ9NP84 129 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 KLHL1Q9NR64 748 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 DEPPQ9NTK1 212 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 THAP1Q9NVV9 213 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 ANKRD10Q9NXR5 420 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 EXO1Q9UQ84 846 aaKnown RBP8.4□□□□□ -1.06
SMC1A-203ENST00000428014 EXPH5Q8NEV8 1989 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 MAST4O15021 2626 aa8.4□□□□□ -1.07
SMC1A-203ENST00000428014 FIGNL2A6NMB9 653 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 FOXO6A8MYZ6 492 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 LINC01387J3KSC0 135 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 WDR1O75083 606 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 SNNO75324 88 aaPredicted RBP8.39□□□□□ -1.07
SMC1A-203ENST00000428014 HPNP05981 417 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 CHRNGP07510 517 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 KRT16P08779 473 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 CT45A8P0DMV1 189 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 CT45A9P0DMV2 189 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 CCL3P10147 92 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 BCKDHAP12694 445 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 PTGS2P35354 604 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 FEN1P39748 380 aaKnown RBP8.39□□□□□ -1.07
SMC1A-203ENST00000428014 CASP3P42574 277 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 ALDH9A1P49189 494 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 RPL14P50914 215 aaKnown RBP8.39□□□□□ -1.07
SMC1A-203ENST00000428014 NR0B1P51843 470 aaKnown RBP8.39□□□□□ -1.07
SMC1A-203ENST00000428014 ABCE1P61221 599 aaKnown RBP8.39□□□□□ -1.07
SMC1A-203ENST00000428014 PSG6Q00889 435 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 SLC10A1Q14973 349 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 TRMT12Q53H54 448 aaKnown RBP8.39□□□□□ -1.07
SMC1A-203ENST00000428014 CT45A2Q5DJT8 189 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 RNFT1Q5M7Z0 435 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 SH2D4BQ5SQS7 431 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 AGBL2Q5U5Z8 902 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 TMEM198Q66K66 360 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 ATG16L1Q676U5 607 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 CLEC6AQ6EIG7 209 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 BHLHB9Q6PI77 547 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 TRILQ7L0X0 811 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 RIMKLAQ8IXN7 391 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 CCDC116Q8IYX3 515 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 CDRT4Q8N9R6 151 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 ACBD4Q8NC06 268 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 OR52R1Q8NGF1 315 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 OR8J2Q8NGG1 315 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 OR2T11Q8NH01 316 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 HGDQ93099 445 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 ELP4Q96EB1 424 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 DMRTA2Q96SC8 542 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 BRINP2Q9C0B6 783 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 BHLHE41Q9C0J9 482 aaPredicted RBP8.39□□□□□ -1.07
SMC1A-203ENST00000428014 NXF5Q9H1B4 397 aaKnown RBP8.39□□□□□ -1.07
SMC1A-203ENST00000428014 GLIPR2Q9H4G4 154 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 CHST11Q9NPF2 352 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 DUSP22Q9NRW4 184 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 TMEM45AQ9NWC5 275 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 NOP53Q9NZM5 478 aaKnown RBP8.39□□□□□ -1.07
SMC1A-203ENST00000428014 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMC1A-203ENST00000428014 OSGIN2Q9Y236 505 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 MEMO1Q9Y316 297 aa8.39□□□□□ -1.07
SMC1A-203ENST00000428014 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.39□□□□□ -1.07
SMC1A-203ENST00000428014 V9GYY5 206 aaPredicted RBP8.39□□□□□ -1.07
SMC1A-203ENST00000428014 NOTCH2Q04721 2471 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 LRRC3CA6NJW4 275 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 NPIPA5E9PKD4 350 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 UPK1AO00322 258 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 PIP5K1BO14986 540 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 SCAMP2O15127 329 aaKnown RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 PDPK1O15530 556 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 LRRTM2O43300 516 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 TSPAN2O60636 221 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 SPAG7O75391 227 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 ERN1O75460 977 aaKnown RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 CBR3O75828 277 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms