RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 AMDHD1Q96NU7 426 aa13.65□□□□□ -0.22
RTN4-210ENST00000427710 PHF12Q96QT6 1004 aa13.65□□□□□ -0.22
RTN4-210ENST00000427710 SORT1Q99523 831 aa13.65□□□□□ -0.22
RTN4-210ENST00000427710 CCT7Q99832 543 aa13.65□□□□□ -0.22
RTN4-210ENST00000427710 DOHHQ9BU89 302 aa13.65□□□□□ -0.22
RTN4-210ENST00000427710 REEP4Q9H6H4 257 aa13.65□□□□□ -0.22
RTN4-210ENST00000427710 ZDHHC11Q9H8X9 412 aa13.65□□□□□ -0.22
RTN4-210ENST00000427710 TMBIM4Q9HC24 238 aa13.65□□□□□ -0.22
RTN4-210ENST00000427710 CNIH4Q9P003 139 aa13.65□□□□□ -0.22
RTN4-210ENST00000427710 SH3BP4Q9P0V3 963 aa13.65□□□□□ -0.22
RTN4-210ENST00000427710 HRH3Q9Y5N1 445 aa13.65□□□□□ -0.22
RTN4-210ENST00000427710 ACTL7BQ9Y614 415 aa13.65□□□□□ -0.22
RTN4-210ENST00000427710 KIAA1549Q9HCM3 1950 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 NPIPA2E9PIF3 369 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 NPIPA3F8WFD2 350 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 BIRC5O15392 142 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 PDPK1O15530 556 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 UGT2B11O75310 529 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 ERN1O75460 977 aaKnown RBP13.64□□□□□ -0.23
RTN4-210ENST00000427710 ZWINTO95229 277 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 CT45A8P0DMV1 189 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 CT45A9P0DMV2 189 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 ESRRAP11474 423 aaPredicted RBP13.64□□□□□ -0.23
RTN4-210ENST00000427710 PPICP45877 212 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 SLC1A6P48664 564 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 WDR4P57081 412 aaKnown RBP13.64□□□□□ -0.23
RTN4-210ENST00000427710 MAGOHP61326 146 aaKnown RBP13.64□□□□□ -0.23
RTN4-210ENST00000427710 ADORA2A-AS1P86434 159 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 HSPB3Q12988 150 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 CT45A2Q5DJT8 189 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 HHATQ5VTY9 493 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 IKBIPQ70UQ0 350 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 SLC44A2Q8IWA5 706 aaPredicted RBP13.64□□□□□ -0.23
RTN4-210ENST00000427710 DND1Q8IYX4 353 aaKnown RBP13.64□□□□□ -0.23
RTN4-210ENST00000427710 SLC34A3Q8N130 599 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 FAM109AQ8N4B1 249 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 C17orf47Q8NEP4 570 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 OR5M9Q8NGP3 310 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 HGDQ93099 445 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 HSPBAP1Q96EW2 488 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 PPP3R2Q96LZ3 170 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 VSTM2LQ96N03 204 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 RILPQ96NA2 401 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 ZFP64Q9NPA5 681 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 PLSCR2Q9NRY7 297 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 TAS2R7Q9NYW3 318 aa13.64□□□□□ -0.23
RTN4-210ENST00000427710 SUCOQ9UBS9 1254 aaKnown RBP13.64□□□□□ -0.23
RTN4-210ENST00000427710 BOKQ9UMX3 212 aaPredicted RBP13.64□□□□□ -0.23
RTN4-210ENST00000427710 GPR55Q9Y2T6 319 aaPredicted RBP13.64□□□□□ -0.23
RTN4-210ENST00000427710 WBP11Q9Y2W2 641 aaKnown RBP13.64□□□□□ -0.23
RTN4-210ENST00000427710 TMEM120BA0PK00 339 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 FRG2CA6NGY1 282 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 TMEM114B3SHH9 223 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 PRRG2O14669 202 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 GNB5O14775 395 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 PLOD3O60568 738 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 REM1O75628 298 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 BCAS2O75934 225 aaPredicted RBP13.63□□□□□ -0.23
RTN4-210ENST00000427710 DRD5P21918 477 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 PTGDSP41222 190 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 CASP3P42574 277 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 TRPC1P48995 793 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 TMED10P49755 219 aaKnown RBP13.63□□□□□ -0.23
RTN4-210ENST00000427710 CDK9P50750 372 aaKnown RBP13.63□□□□□ -0.23
RTN4-210ENST00000427710 STX3Q13277 289 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 SLC10A1Q14973 349 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.63□□□□□ -0.235e-18■□□□□ 8.7
RTN4-210ENST00000427710 ATP6AP1LQ52LC2 224 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 C6orf136Q5SQH8 315 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 IL23RQ5VWK5 629 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 BNC2Q6ZN30 1099 aaPredicted RBP13.63□□□□□ -0.23
RTN4-210ENST00000427710 TRILQ7L0X0 811 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 MAMDC2Q7Z304 686 aaPredicted RBP13.63□□□□□ -0.23
RTN4-210ENST00000427710 CROCCP2Q86T23 111 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 FNDC5Q8NAU1 212 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 OR7A2PQ8NGA2 310 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 FAM57AQ8TBR7 257 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 ITLN2Q8WWU7 325 aaPredicted RBP13.63□□□□□ -0.23
RTN4-210ENST00000427710 PPCDCQ96CD2 204 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 TUBGCP3Q96CW5 907 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 ELP4Q96EB1 424 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 SLC6A15Q9H2J7 730 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 LDAHQ9H6V9 325 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 EXO5Q9H790 373 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 ZNF703Q9H7S9 590 aaPredicted RBP13.63□□□□□ -0.23
RTN4-210ENST00000427710 PNPOQ9NVS9 261 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 MEMO1Q9Y316 297 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 TMED5Q9Y3A6 229 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 CENPEQ02224 2701 aa13.63□□□□□ -0.23
RTN4-210ENST00000427710 CRYBG3Q68DQ2 2970 aa13.62□□□□□ -0.23
RTN4-210ENST00000427710 UPK1AO00322 258 aa13.62□□□□□ -0.23
RTN4-210ENST00000427710 ADAM10O14672 748 aa13.62□□□□□ -0.23
RTN4-210ENST00000427710 TO15178 435 aa13.62□□□□□ -0.23
RTN4-210ENST00000427710 ACOX3O15254 700 aa13.62□□□□□ -0.23
RTN4-210ENST00000427710 TRIM3O75382 744 aaPredicted RBP13.62□□□□□ -0.23
RTN4-210ENST00000427710 GDF1P27539 372 aa13.62□□□□□ -0.23
RTN4-210ENST00000427710 GPC1P35052 558 aa13.62□□□□□ -0.23
RTN4-210ENST00000427710 MASP1P48740 699 aa13.62□□□□□ -0.23
RTN4-210ENST00000427710 DCAF7P61962 342 aa13.62□□□□□ -0.23
RTN4-210ENST00000427710 BST1Q10588 318 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms