RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 IFI6P09912 130 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 IDO1P14902 403 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 EFNA1P20827 205 aaPredicted RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 HPCAL1P37235 193 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 CD97P48960 835 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 EMDP50402 254 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 ST13P50502 369 aaKnown RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 CDK9P50750 372 aaKnown RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 NCBP2P52298 156 aaKnown RBP eCLIP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 SEC24CP53992 1094 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 MANFP55145 182 aaKnown RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 NME5P56597 212 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 MRPS35P82673 323 aaKnown RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 SF3A3Q12874 501 aaKnown RBP eCLIP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 EXOSC7Q15024 291 aaKnown RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 RPS6KA2Q15349 733 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 PGS1Q32NB8 556 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 SOWAHCQ53LP3 525 aaPredicted RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 PIGGQ5H8A4 983 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 RPS26P11Q5JNZ5 115 aaPredicted RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 CPTPQ5TA50 214 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 IRAK1BP1Q5VVH5 260 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 OR4F3Q6IEY1 312 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 PAOXQ6QHF9 649 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 RNF111Q6ZNA4 994 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 BEND4Q6ZU67 534 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 ASB18Q6ZVZ8 466 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 C9orf40Q8IXQ3 194 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 LGI4Q8N135 537 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 SLC5A8Q8N695 610 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 RBMXL3Q8N7X1 1067 aaKnown RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 ZNF441Q8N8Z8 693 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 CATSPER1Q8NEC5 780 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 OR7G2Q8NG99 324 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 OR8J2Q8NGG1 315 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 OR5L2Q8NGL0 311 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 C16orf52Q8NHV5 167 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 C9orf43Q8TAL5 461 aaPredicted RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 THAP3Q8WTV1 239 aaPredicted RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 OR5P2Q8WZ92 322 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 ADIPOR1Q96A54 375 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 ERP27Q96DN0 273 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 ZBED6CLQ96FA7 236 aaPredicted RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 PRPF18Q99633 342 aaKnown RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 SIKE1Q9BRV8 207 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 DUSP26Q9BV47 211 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 TMEM120AQ9BXJ8 343 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 TRIM4Q9C037 500 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 SLC25A18Q9H1K4 315 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 ZNF385DQ9H6B1 395 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 CLMPQ9H6B4 373 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 SIRT3Q9NTG7 399 aaPredicted RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 PLA2G3Q9NZ20 509 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 ZIM2Q9NZV7 527 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 NTMQ9P121 344 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 MYOTQ9UBF9 498 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 BCAP29Q9UHQ4 241 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 C19orf53Q9UNZ5 99 aaPredicted RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 CFAP47Q6ZTR5 3102 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 A0A0G2JND7 137 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 PRSS51A0A1B0GVH4 220 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 GMNCA6NCL1 334 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 C9JVG2 144 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 WWP2O00308 870 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 RNASET2O00584 256 aaKnown RBP6.85□□□□□ -1.31
LINC01049-201ENST00000426840 NME6O75414 186 aaPredicted RBP6.85□□□□□ -1.31
LINC01049-201ENST00000426840 ITGA10O75578 1167 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 SLC22A3O75751 556 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 BCAS2O75934 225 aaPredicted RBP6.85□□□□□ -1.31
LINC01049-201ENST00000426840 SLITRK5O94991 958 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 PSMG1O95456 288 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 NADKO95544 446 aaPredicted RBP6.85□□□□□ -1.31
LINC01049-201ENST00000426840 C6orf47O95873 294 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 ALPPP05187 535 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 TROVE2P10155 538 aaKnown RBP eCLIP6.85□□□□□ -1.31
LINC01049-201ENST00000426840 CD1EP15812 388 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 DDX5P17844 614 aaKnown RBP6.85□□□□□ -1.31
LINC01049-201ENST00000426840 DRD4P21917 467 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 NTSP30990 170 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 LSP1P33241 339 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 S100A3P33764 101 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 TRHRP34981 398 aaPredicted RBP6.85□□□□□ -1.31
LINC01049-201ENST00000426840 CD96P40200 585 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 MC3RP41968 323 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 ATP4BP51164 291 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 DGKQP52824 942 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 ARFIP2P53365 341 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 CLNS1AP54105 237 aaKnown RBP6.85□□□□□ -1.31
LINC01049-201ENST00000426840 HSPB3Q12988 150 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 EBPQ15125 230 aaKnown RBP6.85□□□□□ -1.31
LINC01049-201ENST00000426840 LACTB2Q53H82 288 aaPredicted RBP6.85□□□□□ -1.31
LINC01049-201ENST00000426840 SPANXN4Q5MJ08 99 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 ABHD17BQ5VST6 288 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 METTL21CQ5VZV1 264 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 Q6ZS92 163 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 ZNF227Q86WZ6 799 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 HPS6Q86YV9 775 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 FUNDC1Q8IVP5 155 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 CLECL1Q8IZS7 167 aa6.85□□□□□ -1.31
LINC01049-201ENST00000426840 BEST3Q8N1M1 668 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms