RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 ZNF791Q3KP31 576 aaPredicted RBP22.59■■□□□ 1.21
VEGFA-209ENST00000425836 SPDYE7PQ495Y7 208 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 TIGD2Q4W5G0 525 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 AGKQ53H12 422 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 BLOC1S3Q6QNY0 202 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 SPATA21Q7Z572 469 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 WDR53Q7Z5U6 358 aaPredicted RBP22.59■■□□□ 1.21
VEGFA-209ENST00000425836 CYP4Z2PQ8N1L4 340 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 GOT1L1Q8NHS2 421 aaPredicted RBP22.59■■□□□ 1.21
VEGFA-209ENST00000425836 HSPBAP1Q96EW2 488 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 INPP5KQ9BT40 448 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 RYDENQ9NUL5 291 aaKnown RBP22.59■■□□□ 1.21
VEGFA-209ENST00000425836 HPF1Q9NWY4 346 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 ATRXP46100 2492 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 TO15178 435 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 ACOX3O15254 700 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 FBXO45P0C2W1 286 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 NRG3P56975 720 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 LRRC74AQ0VAA2 488 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 ZNF169Q14929 603 aaPredicted RBP22.59■■□□□ 1.21
VEGFA-209ENST00000425836 CPLX4Q7Z7G2 160 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 HORMAD2Q8N7B1 307 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 OR5AK3PQ8NH89 298 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 SFXN5Q8TD22 340 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 LMF2Q9BU23 707 aaKnown RBP22.59■■□□□ 1.21
VEGFA-209ENST00000425836 NSRP1Q9H0G5 558 aaKnown RBP22.59■■□□□ 1.21
VEGFA-209ENST00000425836 SLC52A3Q9NQ40 469 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 SERHLQ9NQF3 203 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 LUZP4Q9P127 313 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 NPFFR2Q9Y5X5 522 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 ABCD3P28288 659 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 SOAT1P35610 550 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 MAP3K8P41279 467 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 KCNK10P57789 538 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 MFSD12Q6NUT3 480 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 MSANTD1Q6ZTZ1 278 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 MDGA2Q7Z553 956 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 SLC44A2Q8IWA5 706 aaPredicted RBP22.58■■□□□ 1.2
VEGFA-209ENST00000425836 PRR22Q8IZ63 422 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 CLEC4FQ8N1N0 589 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 Q8NA96 180 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 OR56A1Q8NGH5 318 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 HOXB13Q92826 284 aaPredicted RBP22.58■■□□□ 1.2
VEGFA-209ENST00000425836 MOAP1Q96BY2 351 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 SPACA9Q96E40 222 aaPredicted RBP22.58■■□□□ 1.2
VEGFA-209ENST00000425836 C16orf58Q96GQ5 468 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 PANX1Q96RD7 426 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 CPAMD8Q8IZJ3 1885 aa22.58■■□□□ 1.2
VEGFA-209ENST00000425836 NR5A2O00482 541 aa22.57■■□□□ 1.2
VEGFA-209ENST00000425836 SLC25A12O75746 678 aa22.57■■□□□ 1.2
VEGFA-209ENST00000425836 HMGN2P05204 90 aaKnown RBP22.57■■□□□ 1.2
VEGFA-209ENST00000425836 CDKN2CP42773 168 aa22.57■■□□□ 1.2
VEGFA-209ENST00000425836 ZNHIT3Q15649 155 aaPredicted RBP22.57■■□□□ 1.2
VEGFA-209ENST00000425836 VPS26BQ4G0F5 336 aa22.57■■□□□ 1.2
VEGFA-209ENST00000425836 CDRT4Q8N9R6 151 aa22.57■■□□□ 1.2
VEGFA-209ENST00000425836 SPDL1Q96EA4 605 aa22.57■■□□□ 1.2
VEGFA-209ENST00000425836 HES7Q9BYE0 225 aa22.57■■□□□ 1.2
VEGFA-209ENST00000425836 RMND5AQ9H871 391 aa22.57■■□□□ 1.2
VEGFA-209ENST00000425836 SAR1AQ9NR31 198 aa22.57■■□□□ 1.2
VEGFA-209ENST00000425836 GPATCH2Q9NW75 528 aa22.57■■□□□ 1.2
VEGFA-209ENST00000425836 CCDC154A6NI56 674 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 SNX3O60493 162 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 SP1P08047 785 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 CD46P15529 392 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 UQCRC2P22695 453 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 GAB1Q13480 694 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 TP53BP2Q13625 1128 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 LASP1Q14847 261 aaKnown RBP22.56■■□□□ 1.2
VEGFA-209ENST00000425836 MAPKAPK3Q16644 382 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 ZNF766Q5HY98 468 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 EXOSC6Q5RKV6 272 aaKnown RBP22.56■■□□□ 1.2
VEGFA-209ENST00000425836 SLC25A25Q6KCM7 469 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 ZCCHC12Q6PEW1 402 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 OR4N2Q8NGD1 307 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 SCMH1Q96GD3 660 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 SGCZQ96LD1 299 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 YIPF4Q9BSR8 244 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 ANAPC2Q9UJX6 822 aa22.56■■□□□ 1.2
VEGFA-209ENST00000425836 RNF103-CHMP3A0A140T963 221 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 TTC36A6NLP5 189 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 RFXANKO14593 260 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 C1QL1O75973 258 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 ACP2P11117 423 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 CAPN3P20807 821 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 GABRA3P34903 492 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 PRIM2P49643 509 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 UBAP2LQ14157 1087 aaKnown RBP22.55■■□□□ 1.2
VEGFA-209ENST00000425836 NTRK2Q16620 822 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 BHLHB9Q6PI77 547 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 RTL4Q6ZR62 310 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 C6orf120Q7Z4R8 191 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 DND1Q8IYX4 353 aaKnown RBP22.55■■□□□ 1.2
VEGFA-209ENST00000425836 SLC34A3Q8N130 599 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 ZNF843Q8N446 348 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 TMBIM1Q969X1 311 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 TMEM125Q96AQ2 219 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 OMA1Q96E52 524 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 ITCHQ96J02 903 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 C5orf34Q96MH7 638 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 KLHL1Q9NR64 748 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms