RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 METTL27Q8N6F8 245 aaPredicted RBP14.19□□□□□ -0.14
ACTB-204ENST00000425660 CHDHQ8NE62 594 aaPredicted RBP14.19□□□□□ -0.14
ACTB-204ENST00000425660 OR4C15Q8NGM1 316 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 RBM18Q96H35 190 aaKnown RBP14.19□□□□□ -0.14
ACTB-204ENST00000425660 NDC1Q9BTX1 674 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 ALOXE3Q9BYJ1 711 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 FANCEQ9HB96 536 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 ADAP2Q9NPF8 381 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 GMEB2Q9UKD1 530 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 ADAMTS20P59510 1910 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 A8MVJ9 347 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 DSCR3O14972 297 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 COQ9O75208 318 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 SEMA7AO75326 666 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 ZIC2O95409 532 aaPredicted RBP14.18□□□□□ -0.14
ACTB-204ENST00000425660 ALBP02768 609 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 ZNF883P0CG24 379 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 ACP2P11117 423 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 STT3AP46977 705 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 LIMS1P48059 325 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 BTG2P78543 158 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 CHRNEQ04844 493 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 SERTAD2Q14140 314 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 MLIPQ5VWP3 458 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 TCTN3Q6NUS6 607 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 FAHD1Q6P587 224 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 WDR53Q7Z5U6 358 aaPredicted RBP14.18□□□□□ -0.14
ACTB-204ENST00000425660 CYP4Z1Q86W10 505 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 SLC9A6Q92581 669 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 CDS1Q92903 461 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 RIT1Q92963 219 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 ZNF578Q96N58 590 aaPredicted RBP14.18□□□□□ -0.14
ACTB-204ENST00000425660 DHCR7Q9UBM7 475 aaKnown RBP14.18□□□□□ -0.14
ACTB-204ENST00000425660 SCOCQ9UIL1 159 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 ACAD8Q9UKU7 415 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 PCDHGA5Q9Y5G8 931 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 MAU2Q9Y6X3 613 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 IGHV5-10-1A0A0J9YXX1 117 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 A0A1B0GX78 115 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 SYT5O00445 386 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 HYAL3O43820 417 aaPredicted RBP14.18□□□□□ -0.14
ACTB-204ENST00000425660 EPPINO95925 133 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 LGI1O95970 557 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 PABPC4LP0CB38 370 aaKnown RBP14.18□□□□□ -0.14
ACTB-204ENST00000425660 ALAS2P22557 587 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 MPLP40238 635 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 PDX1P52945 283 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 MYBPC1Q00872 1141 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 ACY1Q03154 408 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 DUSP8Q13202 625 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 ERV3-1Q14264 604 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 PRAMEF17Q5VTA0 474 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 FRRS1Q6ZNA5 592 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 DBX2Q6ZNG2 339 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 OLIG3Q7RTU3 272 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 IFI44Q8TCB0 444 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 CYGBQ8WWM9 190 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 PELOQ9BRX2 385 aaKnown RBP14.18□□□□□ -0.14
ACTB-204ENST00000425660 PINK1Q9BXM7 581 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 TOR3AQ9H497 397 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 ZNF696Q9H7X3 374 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 ACER3Q9NUN7 267 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 PDP1Q9P0J1 537 aaPredicted RBP14.18□□□□□ -0.14
ACTB-204ENST00000425660 SRPK3Q9UPE1 567 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 FAM32AQ9Y421 112 aaKnown RBP14.18□□□□□ -0.14
ACTB-204ENST00000425660 TESMINQ9Y4I5 508 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 MMACHCQ9Y4U1 282 aa14.18□□□□□ -0.14
ACTB-204ENST00000425660 ADAMTS9Q9P2N4 1935 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 J3KTA2 159 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 TNFRSF11BO00300 401 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 FFAR1O14842 300 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 HS6ST1O60243 411 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 FCMRO60667 390 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 JRKO75564 520 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 TNFAIP8O95379 198 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 AK1P00568 194 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 ALOX5P09917 674 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 MAOAP21397 527 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 OR1D4P47884 311 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 DAPP51397 102 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 DUSP3P51452 185 aaPredicted RBP14.17□□□□□ -0.14
ACTB-204ENST00000425660 RAD23AP54725 363 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 HPCAP84074 193 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 LAPTM4AQ15012 233 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 EXOSC7Q15024 291 aaKnown RBP14.17□□□□□ -0.14
ACTB-204ENST00000425660 LPAL2Q16609 132 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 ANKRD34AQ69YU3 496 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 KRT80Q6KB66 452 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 TMEM154Q6P9G4 183 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 QSOX2Q6ZRP7 698 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 COMTD1Q86VU5 262 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 C7orf57Q8NEG2 295 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 OR52R1Q8NGF1 315 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 FBXL20Q96IG2 436 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 DHRS1Q96LJ7 313 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 DGAT2Q96PD7 388 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 MBOAT4Q96T53 435 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 SDF2Q99470 211 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 PSD2Q9BQI7 771 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 ZNF350Q9GZX5 532 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms