RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 COMMD6Q7Z4G1 85 aa13.59□□□□□ -0.23
ATG4B-209ENST00000425239 LUZP2Q86TE4 346 aa13.59□□□□□ -0.23
ATG4B-209ENST00000425239 CCDC25Q86WR0 208 aa13.59□□□□□ -0.23
ATG4B-209ENST00000425239 PTGR2Q8N8N7 351 aaPredicted RBP13.59□□□□□ -0.23
ATG4B-209ENST00000425239 ADCY4Q8NFM4 1077 aa13.59□□□□□ -0.23
ATG4B-209ENST00000425239 INTS12Q96CB8 462 aaKnown RBP13.59□□□□□ -0.23
ATG4B-209ENST00000425239 TM9SF2Q99805 663 aa13.59□□□□□ -0.23
ATG4B-209ENST00000425239 OSBPL11Q9BXB4 747 aa13.59□□□□□ -0.23
ATG4B-209ENST00000425239 METTL7AQ9H8H3 244 aa13.59□□□□□ -0.23
ATG4B-209ENST00000425239 ZDHHC18Q9NUE0 388 aa13.59□□□□□ -0.23
ATG4B-209ENST00000425239 BEX4Q9NWD9 120 aaPredicted RBP13.59□□□□□ -0.23
ATG4B-209ENST00000425239 EHD3Q9NZN3 535 aa13.59□□□□□ -0.23
ATG4B-209ENST00000425239 CPSF2Q9P2I0 782 aaKnown RBP13.59□□□□□ -0.23
ATG4B-209ENST00000425239 PYCARDQ9ULZ3 195 aa13.59□□□□□ -0.23
ATG4B-209ENST00000425239 MAPRE3Q9UPY8 281 aa13.59□□□□□ -0.23
ATG4B-209ENST00000425239 PCNX3Q9H6A9 2034 aa13.59□□□□□ -0.23
ATG4B-209ENST00000425239 SH3D21A4FU49 640 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 STX16-NPEPL1H3BU86 382 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 STX16O14662 325 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 HCRTR2O43614 444 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 NME6O75414 186 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-209ENST00000425239 TGM6O95932 706 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 DRD2P14416 443 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 ZNF708P17019 499 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 CSNK2A2P19784 350 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-209ENST00000425239 CNTFP26441 200 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 B3GALT5-AS1P59052 145 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 NKX6-1P78426 367 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-209ENST00000425239 RCAN2Q14206 197 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 POU4F3Q15319 338 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 LTB4RQ15722 352 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 C10orf62Q5T681 223 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-209ENST00000425239 PLCZ1Q86YW0 608 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 CIARTQ8N365 385 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-209ENST00000425239 OR4F6Q8NGB9 312 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 OR52R1Q8NGF1 315 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 MRRFQ96E11 262 aaKnown RBP13.58□□□□□ -0.24
ATG4B-209ENST00000425239 PHF21BQ96EK2 531 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 MARK4Q96L34 752 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 LRRC1Q9BTT6 524 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 FUT8Q9BYC5 575 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 ANKRA2Q9H9E1 313 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 NEUROD4Q9HD90 331 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 HEY2Q9UBP5 337 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 FBXL2Q9UKC9 423 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 CFL2Q9Y281 166 aa13.58□□□□□ -0.24
ATG4B-209ENST00000425239 FBN1P35555 2871 aaKnown RBP13.57□□□□□ -0.24
ATG4B-209ENST00000425239 OR6C70A6NIJ9 312 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 C17orf51A8MQB3 221 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 DEFB108AA8MXU0 73 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 PLOD2O00469 737 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 TSPAN2O60636 221 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 ERN1O75460 977 aaKnown RBP13.57□□□□□ -0.24
ATG4B-209ENST00000425239 PDYNP01213 254 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 PCSK2P16519 638 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 TYK2P29597 1187 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 CCNG1P51959 295 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 MAPK12P53778 367 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 MRPS35P82673 323 aaKnown RBP13.57□□□□□ -0.24
ATG4B-209ENST00000425239 SRYQ05066 204 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 FAM27E3Q08E93 113 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 ZNF628Q5EBL2 1059 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 LETMD1Q6P1Q0 360 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 C22orf34Q6ZV56 151 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 PAGE2Q7Z2X7 111 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 GCNT2Q8N0V5 402 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 TMBIM1Q969X1 311 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 STARD4Q96DR4 205 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 SLC35A4Q96G79 324 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 YIPF4Q9BSR8 244 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 C1QTNF3Q9BXJ4 246 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 BRINP2Q9C0B6 783 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 GRPEL1Q9HAV7 217 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 AHSPQ9NZD4 102 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 BCAP29Q9UHQ4 241 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 UTP11Q9Y3A2 253 aaKnown RBP13.57□□□□□ -0.24
ATG4B-209ENST00000425239 TESMINQ9Y4I5 508 aa13.57□□□□□ -0.24
ATG4B-209ENST00000425239 RAI1Q7Z5J4 1906 aaPredicted RBP13.56□□□□□ -0.24
ATG4B-209ENST00000425239 ARID1AO14497 2285 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 PRAMEF25A6NGN4 478 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 FRG2CA6NGY1 282 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 CTIFO43310 598 aaKnown RBP13.56□□□□□ -0.24
ATG4B-209ENST00000425239 ERAL1O75616 437 aaKnown RBP13.56□□□□□ -0.24
ATG4B-209ENST00000425239 RPS17P08708 135 aaKnown RBP13.56□□□□□ -0.24
ATG4B-209ENST00000425239 KRT15P19012 456 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 CHMP24386 653 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 LOXP28300 417 aaPredicted RBP13.56□□□□□ -0.24
ATG4B-209ENST00000425239 SRD5A2P31213 254 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 PLCXD2Q0VAA5 305 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 GAB1Q13480 694 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 BCL2A1Q16548 175 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 SHEQ5VZ18 495 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 FBXW10Q5XX13 1052 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 ENPP6Q6UWR7 440 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 MILR1Q7Z6M3 343 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 LRRC75A-AS1Q8N1F1 130 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 OR14L1PQ8NHC6 308 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 RDH11Q8TC12 318 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 ZNF675Q8TD23 568 aa13.56□□□□□ -0.24
ATG4B-209ENST00000425239 ZNF483Q8TF39 744 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms