RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 TBXA2RP21731 343 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 DRD5P21918 477 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 KCNJ5P48544 419 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 NR1H2P55055 460 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 MGAT2Q10469 447 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 MAP4K2Q12851 820 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 FGFBP1Q14512 234 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 CLEC12BQ2HXU8 276 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 ZNF704Q6ZNC4 412 aaPredicted RBP15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 CHMP1BQ7LBR1 199 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 ISCA2Q86U28 154 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 ANKMY2Q8IV38 441 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 ZNF610Q8N9Z0 462 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 UBTD2Q8WUN7 234 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 ZNF845Q96IR2 970 aaPredicted RBP15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 REG4Q9BYZ8 158 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 SMYD2Q9NRG4 433 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 NUDT4Q9NZJ9 180 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 ZNF639Q9UID6 485 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 FBXL2Q9UKC9 423 aa15.1■□□□□ 0.01
CHCHD3-202ENST00000423635 A0A087X1B8 175 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 OR6C70A6NIJ9 312 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 CD5LO43866 347 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 PEPDP12955 493 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 PPP3CBP16298 524 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 PORP16435 677 aaPredicted RBP15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 STMN1P16949 149 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 CNTFP26441 200 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 ARL4CP56559 192 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 CLDN15P56746 228 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 B3GALT5-AS1P59052 145 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 PHEXP78562 749 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 PLCXD2Q0VAA5 305 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 ZKSCAN8Q15776 578 aaPredicted RBP15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 ETFDHQ16134 617 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 NNATQ16517 81 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 PRICKLE4Q2TBC4 344 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 C6orf163Q5TEZ5 329 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 NUDT13Q86X67 352 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 MAPK1IP1LQ8NDC0 245 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 FBXO36Q8NEA4 188 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 FIG4Q92562 907 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 TMCO6Q96DC7 493 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 TMEM204Q9BSN7 226 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 ITPAQ9BY32 194 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 RNF122Q9H9V4 155 aa15.09■□□□□ 0.01
CHCHD3-202ENST00000423635 FOXE1O00358 373 aaPredicted RBP15.08■□□□□ 0
CHCHD3-202ENST00000423635 HS3ST1O14792 307 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 TNFRSF21O75509 655 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 GBAP04062 536 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 TP53P04637 393 aaPredicted RBP15.08■□□□□ 0
CHCHD3-202ENST00000423635 PPICP45877 212 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 EEFSECP57772 596 aaKnown RBP15.08■□□□□ 0
CHCHD3-202ENST00000423635 GUSBP1Q15486 140 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 ANKRD34AQ69YU3 496 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 FAM111BQ6SJ93 734 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 WDR20Q8TBZ3 569 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 EXT2Q93063 718 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 REPS1Q96D71 796 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 ATOH8Q96SQ7 321 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 GPR22Q99680 433 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 LRRC1Q9BTT6 524 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 DDX47Q9H0S4 455 aaKnown RBP15.08■□□□□ 0
CHCHD3-202ENST00000423635 ALG9Q9H6U8 611 aa15.08■□□□□ 0
CHCHD3-202ENST00000423635 B4DXG7 233 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 E7ESA3 106 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 OVOL3O00110 214 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 UGDHO60701 494 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 PIAS1O75925 651 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 PLAUP00749 431 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 ATP1B1P05026 303 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 DPP4P27487 766 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 IDUAP35475 653 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 SIRPAP78324 504 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 TEX9Q8N6V9 391 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 GBP7Q8N8V2 638 aaPredicted RBP15.07■□□□□ 0
CHCHD3-202ENST00000423635 RNF138Q8WVD3 245 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 SLC35A4Q96G79 324 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 COL21A1Q96P44 957 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 KLHL4Q9C0H6 718 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 MAT2BQ9NZL9 334 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 EHD3Q9NZN3 535 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 BCAP29Q9UHQ4 241 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 CES1P1Q9UKY3 287 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 PROCRQ9UNN8 238 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 ANK2Q01484 3957 aa15.07■□□□□ 0
CHCHD3-202ENST00000423635 GOLGA6L6A8MZA4 724 aa15.06■□□□□ 0
CHCHD3-202ENST00000423635 UBXN8O00124 270 aa15.06■□□□□ 0
CHCHD3-202ENST00000423635 TP73O15350 636 aa15.06■□□□□ 0
CHCHD3-202ENST00000423635 ABCB7O75027 752 aa15.06■□□□□ 0
CHCHD3-202ENST00000423635 SEMA3DO95025 777 aa15.06■□□□□ 0
CHCHD3-202ENST00000423635 CBX7O95931 251 aa15.06■□□□□ 0
CHCHD3-202ENST00000423635 MTHFD2P13995 350 aa15.06■□□□□ 0
CHCHD3-202ENST00000423635 SUCLG1P53597 346 aaKnown RBP15.06■□□□□ 0
CHCHD3-202ENST00000423635 DSCR4P56555 118 aaPredicted RBP15.06■□□□□ 0
CHCHD3-202ENST00000423635 RAB10P61026 200 aa15.06■□□□□ 0
CHCHD3-202ENST00000423635 RPS4XP62701 263 aaKnown RBP15.06■□□□□ 0
CHCHD3-202ENST00000423635 OCRLQ01968 901 aa15.06■□□□□ 0
CHCHD3-202ENST00000423635 PDIA2Q13087 525 aaKnown RBP15.06■□□□□ 0
CHCHD3-202ENST00000423635 VEZF1Q14119 521 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms