RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RPS19BP1Q86WX3 136 aaKnown RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 NUDT13Q86X67 352 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 TDRPQ86YL5 185 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 CNPY4Q8N129 248 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 APCDD1LQ8NCL9 501 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 MDS2Q8NDY4 140 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 B3GNT7Q8NFL0 401 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 OR4F6Q8NGB9 312 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 GRHL3Q8TE85 626 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 RAB24Q969Q5 203 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 VMP1Q96GC9 406 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 TMEM237Q96Q45 408 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 TAAR6Q96RI8 345 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 SERPINI1Q99574 410 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 ERVK-6Q9BXR3 956 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 ELOVL6Q9H5J4 265 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 DDX31Q9H8H2 851 aaKnown RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 PPCSQ9HAB8 311 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 PNO1Q9NRX1 252 aaKnown RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 AGPAT4Q9NRZ5 378 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 LYARQ9NX58 379 aaKnown RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 MS4A12Q9NXJ0 267 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 ANKRD10Q9NXR5 420 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 PSD3Q9NYI0 1048 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 ABI3Q9P2A4 366 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 PHF11Q9UIL8 331 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF225Q9UK10 706 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF223Q9UK11 482 aaPredicted RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 FBXW2Q9UKT8 454 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 EMCNQ9ULC0 261 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 PPIEQ9UNP9 301 aaKnown RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 ATG4BQ9Y4P1 393 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 DOPEY2Q9Y3R5 2298 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 ESPL1Q14674 2120 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 SVILO95425 2214 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 POLEQ07864 2286 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 SPTBN1Q01082 2364 aaKnown RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 ANKUB1A6NFN9 424 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 GABRR3A8MPY1 467 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 C17orf105B2RV13 164 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 FGF17O60258 216 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 PRAMEF2O60811 474 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 CDH16O75309 829 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 PRKRAO75569 313 aaKnown RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 SUPT7LO94864 414 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 OR4F21O95013 312 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 SLU7O95391 586 aaKnown RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 IFNA16P05015 189 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 NR2F6P10588 404 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 CLCN2P51788 898 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 GPR143P51810 404 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 PRKAA2P54646 552 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 HNRNPH2P55795 449 aaKnown RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 PER3P56645 1201 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 MLF1P58340 268 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 IGLV3-21P80748 117 aaPredicted RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 ID2Q02363 134 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 OC90Q02509 493 aaPredicted RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 FOLH1Q04609 750 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 SERTAD2Q14140 314 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 OR1C1Q15619 314 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 UNC50Q53HI1 259 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 SGO1Q5FBB7 561 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 C10orf62Q5T681 223 aaPredicted RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 C18orf63Q68DL7 685 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 TTC19Q6DKK2 380 aaPredicted RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 WDR93Q6P2C0 686 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 CYP20A1Q6UW02 462 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 ZYG11AQ6WRX3 759 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 SH2D5Q6ZV89 423 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 OR4N5Q8IXE1 308 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 TMEM132CQ8N3T6 1108 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 BCORP1Q8N888 145 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 ZBTB34Q8NCN2 500 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 OR14A16Q8NHC5 309 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 PPP1R35Q8TAP8 253 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 SUN3Q8TAQ9 357 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 TRPC4APQ8TEL6 797 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 AENQ8WTP8 325 aaKnown RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 PTPMT1Q8WUK0 201 aaPredicted RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 FAR1Q8WVX9 515 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 NCLNQ969V3 563 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 ANKRD9Q96BM1 317 aaPredicted RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 MTFMTQ96DP5 389 aaKnown RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 L3HYPDHQ96EM0 354 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 C1GALT1C1Q96EU7 318 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 SCMH1Q96GD3 660 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 SIGLEC12Q96PQ1 595 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF382Q96SR6 550 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 HBEGFQ99075 208 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 SLX1AQ9BQ83 275 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 UTP23Q9BRU9 249 aaKnown RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 ALOXE3Q9BYJ1 711 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 DEFB126Q9BYW3 111 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 SLC6A15Q9H2J7 730 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 CDCP1Q9H5V8 836 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 RPF2Q9H7B2 306 aaKnown RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 FARSBQ9NSD9 589 aaKnown RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 OLAHQ9NV23 265 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms