RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 GPSM3Q9Y4H4 160 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 LRRK1Q38SD2 2015 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 PLXNA2O75051 1894 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 HYKKA2RU49 373 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 HRO43593 1189 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 MSL3P1P0C860 447 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 VEGFBP49765 207 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
LIMK1-202ENST00000418310 PCBP4P57723 403 aaKnown RBP11.2□□□□□ -0.62
LIMK1-202ENST00000418310 SNRPNP63162 240 aaKnown RBP11.2□□□□□ -0.62
LIMK1-202ENST00000418310 ELAVL3Q14576 367 aaKnown RBP11.2□□□□□ -0.62
LIMK1-202ENST00000418310 ZNF311Q5JNZ3 666 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 HSDL2Q6YN16 418 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 NKAIN4Q8IVV8 208 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 GHDCQ8N2G8 530 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 OR6F1Q8NGZ6 308 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 OR5K2Q8NHB8 316 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 TMCO6Q96DC7 493 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 CNRIP1Q96F85 164 aaPredicted RBP11.2□□□□□ -0.62
LIMK1-202ENST00000418310 RHBGQ9H310 441 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 SYNPO2LQ9H987 977 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 RMI1Q9H9A7 625 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 A3GALT2U3KPV4 340 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 IGKV1-8A0A0C4DH67 115 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 FCMRO60667 390 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 SEMA3DO95025 777 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 ADH1CP00326 375 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 BCL6P41182 706 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 MAPK9P45984 424 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 LIMK1P53667 647 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 SNRPGP62308 76 aaKnown RBP11.19□□□□□ -0.62
LIMK1-202ENST00000418310 FUT5Q11128 374 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 E2F2Q14209 437 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 P2RY14Q15391 338 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 CCNJQ5T5M9 372 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 ZNF544Q6NX49 715 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 FBXL6Q8N531 539 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 ZCCHC10Q8TBK6 192 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 SETD7Q8WTS6 366 aaKnown RBP11.19□□□□□ -0.62
LIMK1-202ENST00000418310 SRRQ9GZT4 340 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 SLC6A17Q9H1V8 727 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 MED20Q9H944 212 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 NDUFB11Q9NX14 153 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 ICKQ9UPZ9 632 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 SDK1Q7Z5N4 2213 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 NPIPA5A0A0B4J1W7 369 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 A0A1W2PP55 124 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 A0A1W2PR48 441 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 CENPXA8MT69 81 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 NPIPA7E9PJI5 369 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 HPGDSO60760 199 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 FGBP02675 491 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 NPIPA8P0DM63 369 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 PSKH1P11801 424 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 FABP5Q01469 135 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 C6orf132Q5T0Z8 1188 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 FCRLBQ6BAA4 426 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 IL20RBQ6UXL0 311 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 KLHDC8AQ8IYD2 350 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 TMEFF1Q8IYR6 380 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 UBQLNLQ8IYU4 475 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 FBXO15Q8NCQ5 510 aaPredicted RBP11.19□□□□□ -0.62
LIMK1-202ENST00000418310 PROKR2Q8NFJ6 384 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 SMG7Q92540 1137 aaKnown RBP11.19□□□□□ -0.62
LIMK1-202ENST00000418310 HHIPL1Q96JK4 782 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 ZNF514Q96K75 400 aaPredicted RBP11.19□□□□□ -0.62
LIMK1-202ENST00000418310 SEMA4GQ9NTN9 838 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 NFKBIL1Q9UBC1 381 aaPredicted RBP11.19□□□□□ -0.62
LIMK1-202ENST00000418310 A0A1W2PPV9 198 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 CCDC182A6NF36 153 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 ZNF860A6NHJ4 632 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 SMLR1H3BR10 107 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 CSF3P09919 207 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 CDH11P55287 796 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 SEC13P55735 322 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 KRR1Q13601 381 aaKnown RBP11.19□□□□□ -0.62
LIMK1-202ENST00000418310 IL18Q14116 193 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 SLC9A5Q14940 896 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 MLF2Q15773 248 aaPredicted RBP11.19□□□□□ -0.62
LIMK1-202ENST00000418310 PSRC1Q6PGN9 363 aaPredicted RBP11.19□□□□□ -0.62
LIMK1-202ENST00000418310 GET4Q7L5D6 327 aaPredicted RBP11.19□□□□□ -0.62
LIMK1-202ENST00000418310 GALNT12Q8IXK2 581 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 ENKURQ8TC29 256 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 PPP1R16AQ96I34 528 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 LRIG1Q96JA1 1093 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 KCTD7Q96MP8 289 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 TMEM246Q9BRR3 403 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 SPHK1Q9NYA1 384 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 ENTPD4Q9Y227 616 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 INSL6Q9Y581 213 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 NOX1Q9Y5S8 564 aa11.19□□□□□ -0.62
LIMK1-202ENST00000418310 ISM1B1AKI9 464 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 CXCR2P25025 360 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 TRHRP34981 398 aaPredicted RBP11.18□□□□□ -0.62
LIMK1-202ENST00000418310 MTNR1AP48039 350 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 WNT4P56705 351 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 STXBP1P61764 594 aaKnown RBP11.18□□□□□ -0.62
LIMK1-202ENST00000418310 SCN1BQ07699 218 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 MLLT11Q13015 90 aaPredicted RBP11.18□□□□□ -0.62
LIMK1-202ENST00000418310 ELOAQ14241 798 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms