RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 NPIPB8E9PQR5 432 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 TO15178 435 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 COQ9O75208 318 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 TRAPPC6AO75865 159 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 SLITRK5O94991 958 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 JUNP05412 331 aaKnown RBP14.04□□□□□ -0.16
NUP50-204ENST00000417702 FGF4P08620 206 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 ACVR2AP27037 513 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 KRT20P35900 424 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 PSPHP78330 225 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 KIAA0040Q15053 153 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 ARL13AQ5H913 290 aaPredicted RBP14.04□□□□□ -0.16
NUP50-204ENST00000417702 EMC4Q5J8M3 183 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 BEND6Q5SZJ8 279 aaPredicted RBP14.04□□□□□ -0.16
NUP50-204ENST00000417702 CEP85LQ5SZL2 805 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 KANK2Q63ZY3 851 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 LRIG3Q6UXM1 1119 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 RNF165Q6ZSG1 346 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 ACAD11Q709F0 780 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 CLYBLQ8N0X4 340 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.04□□□□□ -0.16
NUP50-204ENST00000417702 ASB5Q8WWX0 329 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 BTBD9Q96Q07 612 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 MECRQ9BV79 373 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 ANKRA2Q9H9E1 313 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 TRAF6Q9Y4K3 522 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 DNAJC15Q9Y5T4 150 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 PTGDR2Q9Y5Y4 395 aa14.04□□□□□ -0.16
NUP50-204ENST00000417702 CREBBPQ92793 2442 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 ABCB7O75027 752 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 WDR1O75083 606 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 ERN1O75460 977 aaKnown RBP14.03□□□□□ -0.16
NUP50-204ENST00000417702 REM1O75628 298 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 CHRNGP07510 517 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 LINC00032P0C843 101 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 ELAVL4P26378 380 aaKnown RBP14.03□□□□□ -0.16
NUP50-204ENST00000417702 SERPINB5P36952 375 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 PMPCAQ10713 525 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 SNTA1Q13424 505 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 SLC30A6Q6NXT4 461 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 TMEM81Q6P7N7 255 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 Q6ZSR9 355 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 DDIASQ8IXT1 998 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 MARVELD2Q8N4S9 558 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 OR7G2Q8NG99 324 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 NEIL3Q8TAT5 605 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 HGDQ93099 445 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 TMBIM1Q969X1 311 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 TMCO6Q96DC7 493 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 TMEM41AQ96HV5 264 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 VSTM2LQ96N03 204 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 COL21A1Q96P44 957 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 CCT7Q99832 543 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 SLC6A15Q9H2J7 730 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 CENPHQ9H3R5 247 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 FOLH1BQ9HBA9 442 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 ALKBH4Q9NXW9 302 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 KLRF1Q9NZS2 232 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 TNFRSF10DQ9UBN6 386 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 TMED5Q9Y3A6 229 aa14.03□□□□□ -0.16
NUP50-204ENST00000417702 A0A087WV62 115 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 OR6C70A6NIJ9 312 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 GNB5O14775 395 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 CTIFO43310 598 aaKnown RBP14.02□□□□□ -0.17
NUP50-204ENST00000417702 UGT2B11O75310 529 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 HOXD4P09016 255 aaPredicted RBP14.02□□□□□ -0.17
NUP50-204ENST00000417702 MYZAPP0CAP1 466 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 COX6B1P14854 86 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 GABRA1P14867 456 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 CHRNB4P30926 498 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 TRPC1P48995 793 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 CDK9P50750 372 aaKnown RBP14.02□□□□□ -0.17
NUP50-204ENST00000417702 CORO7P57737 925 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 RPL38P63173 70 aaKnown RBP14.02□□□□□ -0.17
NUP50-204ENST00000417702 ZNF155Q12901 538 aaPredicted RBP14.02□□□□□ -0.17
NUP50-204ENST00000417702 TOMM20Q15388 145 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 CDSNQ15517 529 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 PRSS53Q2L4Q9 553 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 SH2D4BQ5SQS7 431 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 TIGD3Q6B0B8 471 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 ANGPTL8Q6UXH0 198 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 B3GNT6Q6ZMB0 384 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 ZCCHC23Q6ZST2 131 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 SLC44A2Q8IWA5 706 aaPredicted RBP14.02□□□□□ -0.17
NUP50-204ENST00000417702 OR1J4Q8NGS1 313 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 OR2T11Q8NH01 316 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 PPP1R14CQ8TAE6 165 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 TWIST2Q8WVJ9 160 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 EGLN2Q96KS0 407 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 GNRHR2Q96P88 292 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 NODALQ96S42 347 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 OSBPL11Q9BXB4 747 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 TUBB1Q9H4B7 451 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 GLIPR2Q9H4G4 154 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 DDX18Q9NVP1 670 aaKnown RBP14.02□□□□□ -0.17
NUP50-204ENST00000417702 ARGLU1Q9NWB6 273 aaPredicted RBP14.02□□□□□ -0.17
NUP50-204ENST00000417702 SPRR3Q9UBC9 169 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 EXO1Q9UQ84 846 aaKnown RBP14.02□□□□□ -0.17
NUP50-204ENST00000417702 C15orf41Q9Y2V0 281 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 OR10H1Q9Y4A9 318 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms