RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 MIEF1Q9NQG6 463 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 RRAGDQ9NQL2 400 aaPredicted RBP9.37□□□□□ -0.91
HDLBP-206ENST00000417540 C1orf109Q9NX04 203 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 SIRT5Q9NXA8 310 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 MAPRE3Q9UPY8 281 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 MEMO1Q9Y316 297 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 FAM215AQ9Y5M1 114 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 NPFFR2Q9Y5X5 522 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.37□□□□□ -0.91
HDLBP-206ENST00000417540 APCP25054 2843 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 GXYLT2A0PJZ3 443 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 PRAMEF25A6NGN4 478 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 FRG2CA6NGY1 282 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 FAM90A27PA6NNH2 459 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 C9JVG2 144 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 PRSS44E7EML9 344 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 KLRC4-KLRK1H3BQV0 150 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 ACOT7O00154 380 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 SCAMP2O15127 329 aaKnown RBP9.36□□□□□ -0.91
HDLBP-206ENST00000417540 PDPK1O15530 556 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 ICOSLGO75144 302 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 PEX11AO75192 247 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 TRIM3O75382 744 aaPredicted RBP9.36□□□□□ -0.91
HDLBP-206ENST00000417540 SEC22BO75396 215 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 PPM1BO75688 479 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 SNRPB2P08579 225 aaKnown RBP9.36□□□□□ -0.91
HDLBP-206ENST00000417540 CT45A8P0DMV1 189 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 CT45A9P0DMV2 189 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 NEFHP12036 1026 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 PRF1P14222 555 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 GDF1P27539 372 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 NTSP30990 170 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 WDR4P57081 412 aaKnown RBP9.36□□□□□ -0.91
HDLBP-206ENST00000417540 RBPJQ06330 500 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 MAP4K2Q12851 820 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 PDE7AQ13946 482 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 CT45A2Q5DJT8 189 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 BEND6Q5SZJ8 279 aaPredicted RBP9.36□□□□□ -0.91
HDLBP-206ENST00000417540 SZRD1Q7Z422 152 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 ZAR1Q86SH2 424 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 LIX1Q8N485 282 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 OR7G1Q8NGA0 311 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 OR7A2PQ8NGA2 310 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 BBS4Q96RK4 519 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 IL1RL2Q9HB29 575 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 SIRT3Q9NTG7 399 aaPredicted RBP9.36□□□□□ -0.91
HDLBP-206ENST00000417540 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDLBP-206ENST00000417540 SENP1Q9P0U3 644 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 C15orf41Q9Y2V0 281 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 SLC6A5Q9Y345 797 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 ZNF780BQ9Y6R6 833 aa9.36□□□□□ -0.91
HDLBP-206ENST00000417540 NUP214P35658 2090 aaPredicted RBP9.36□□□□□ -0.91
HDLBP-206ENST00000417540 TACC2O95359 2948 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 ABCA12Q86UK0 2595 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 UPK1AO00322 258 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 SLC28A1O00337 649 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 SNPHO15079 494 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 RGS14O43566 566 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 SCO2O43819 266 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 TSPAN2O60636 221 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 GUCY1B2O75343 617 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 ERN1O75460 977 aaKnown RBP9.35□□□□□ -0.91
HDLBP-206ENST00000417540 IGKV1D-16P01601 117 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 IGHG3P01860 377 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 C1QCP02747 245 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 ABCB1P08183 1280 aaPredicted RBP9.35□□□□□ -0.91
HDLBP-206ENST00000417540 ACP2P11117 423 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 BCKDHAP12694 445 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 CYP4B1P13584 511 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 DRD2P14416 443 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 CNR1P21554 472 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 PTGS2P35354 604 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 RFX3P48380 749 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 NUP107P57740 925 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 PSG6Q00889 435 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 STX5Q13190 355 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 HEPACAMQ14CZ8 416 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 EIPR1Q53HC9 387 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 HLA-DQA1Q5Y7H0 255 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 RTL6Q6ICC9 239 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 ANGPTL8Q6UXH0 198 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 RNF165Q6ZSG1 346 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 IKBIPQ70UQ0 350 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 MRGPRGQ86SM5 289 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 TAGAPQ8N103 731 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 SLC34A3Q8N130 599 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 PIK3R3Q92569 461 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 NTNG2Q96CW9 530 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 GIMAP5Q96F15 307 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 LCORQ96JN0 433 aaPredicted RBP9.35□□□□□ -0.91
HDLBP-206ENST00000417540 TRMOQ9BU70 441 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 UBQLN3Q9H347 655 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 SERHLQ9NQF3 203 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 GIMAP4Q9NUV9 329 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 DDX18Q9NVP1 670 aaKnown RBP9.35□□□□□ -0.91
HDLBP-206ENST00000417540 NMRK1Q9NWW6 199 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 MARCOQ9UEW3 520 aaPredicted RBP9.35□□□□□ -0.91
HDLBP-206ENST00000417540 FBXL2Q9UKC9 423 aa9.35□□□□□ -0.91
HDLBP-206ENST00000417540 TRAF6Q9Y4K3 522 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms