RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 OR2A1Q8NGT9 310 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 WFIKKN2Q8TEU8 576 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 PAWRQ96IZ0 340 aaKnown RBP13.62□□□□□ -0.23
HDAC9-208ENST00000417496 ST6GAL2Q96JF0 529 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 PHOX2BQ99453 314 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 KATNB1Q9BVA0 655 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 C11orf54Q9H0W9 315 aaPredicted RBP13.62□□□□□ -0.23
HDAC9-208ENST00000417496 TRPM6Q9BX84 2022 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 KIAA1549LQ6ZVL6 1849 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 IQCMA0A1B0GVH7 501 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 HOXC11O43248 304 aaPredicted RBP13.62□□□□□ -0.23
HDAC9-208ENST00000417496 NCR1O76036 304 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 FGBP02675 491 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 TRHRP34981 398 aaPredicted RBP13.62□□□□□ -0.23
HDAC9-208ENST00000417496 AVPR1BP47901 424 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 WNT4P56705 351 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 TAS2R38P59533 333 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 CHRNEQ04844 493 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 RPA4Q13156 261 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 CAMK1Q14012 370 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 ARHGAP19Q14CB8 494 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 ARHGEF6Q15052 776 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 TMEM52BQ4KMG9 183 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 SLC30A6Q6NXT4 461 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 GLCCI1Q86VQ1 547 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 TRIM48Q8IWZ4 208 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 OR4F15Q8NGB8 312 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 SPPL3Q8TCT6 385 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 TMEM245Q9H330 911 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 C6orf106Q9H6K1 298 aaPredicted RBP13.62□□□□□ -0.23
HDAC9-208ENST00000417496 COMMD3Q9UBI1 195 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 PCDHGB2Q9Y5G2 931 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 EYSQ5T1H1 3165 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 NARSO43776 548 aaKnown RBP13.61□□□□□ -0.23
HDAC9-208ENST00000417496 MTNR1AP48039 350 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 SMSP52788 366 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 TAS2R41P59536 307 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 SNRPNP63162 240 aaKnown RBP13.61□□□□□ -0.23
HDAC9-208ENST00000417496 PRDX1Q06830 199 aaKnown RBP13.61□□□□□ -0.23
HDAC9-208ENST00000417496 COX10Q12887 443 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 TBRG1Q3YBR2 411 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 PIP5KL1Q5T9C9 394 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
HDAC9-208ENST00000417496 ZNF707Q96C28 371 aaPredicted RBP13.61□□□□□ -0.23
HDAC9-208ENST00000417496 HDHD5Q9BXW7 423 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 PLSCR3Q9NRY6 295 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 SEMA4GQ9NTN9 838 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 SERGEFQ9UGK8 458 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 CARNS1A5YM72 827 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 FCMRO60667 390 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 NR2F6P10588 404 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 CERS1P27544 350 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 APEX1P27695 318 aaKnown RBP13.61□□□□□ -0.23
HDAC9-208ENST00000417496 PRMT2P55345 433 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 SLC9A5Q14940 896 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 PYDC2Q56P42 97 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 ZNF311Q5JNZ3 666 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 SLC27A4Q6P1M0 643 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 ACOT4Q8N9L9 421 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 SIMC1Q8NDZ2 872 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 ATP6V1C2Q8NEY4 427 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 ANKK1Q8NFD2 765 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 NLGN4YQ8NFZ3 816 aaPredicted RBP13.61□□□□□ -0.23
HDAC9-208ENST00000417496 CHAC2Q8WUX2 184 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 KAT2AQ92830 837 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 ARMC5Q96C12 935 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 PRRC1Q96M27 445 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 KCTD7Q96MP8 289 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 FCRL4Q96PJ5 515 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 FYTTD1Q96QD9 318 aaKnown RBP13.61□□□□□ -0.23
HDAC9-208ENST00000417496 TBC1D17Q9HA65 648 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 MOV10Q9HCE1 1003 aaKnown RBP13.61□□□□□ -0.23
HDAC9-208ENST00000417496 POLMQ9NP87 494 aaPredicted RBP13.61□□□□□ -0.23
HDAC9-208ENST00000417496 PRSS16Q9NQE7 514 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 TAS2R7Q9NYW3 318 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 NUFIP1Q9UHK0 495 aaKnown RBP13.61□□□□□ -0.23
HDAC9-208ENST00000417496 MOSPD1Q9UJG1 213 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 SF3B6Q9Y3B4 125 aaKnown RBP13.61□□□□□ -0.23
HDAC9-208ENST00000417496 CHST2Q9Y4C5 530 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 LTBP2Q14767 1821 aa13.61□□□□□ -0.23
HDAC9-208ENST00000417496 SLC35F4A4IF30 521 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 FAM170BA6NMN3 283 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 FAM47E-STBD1D6RA91 191 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 DVL2O14641 736 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 IL1AP01583 271 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 LIMS3P0CW19 117 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 LIMS4P0CW20 117 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 NTSP30990 170 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 MC3RP41968 323 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 VASPP50552 380 aaPredicted RBP13.6□□□□□ -0.23
HDAC9-208ENST00000417496 RNF144AP50876 292 aaPredicted RBP13.6□□□□□ -0.23
HDAC9-208ENST00000417496 HTRA4P83105 476 aaPredicted RBP13.6□□□□□ -0.23
HDAC9-208ENST00000417496 BNC1Q01954 994 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 SCN1BQ07699 218 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 LTB4RQ15722 352 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 ZFP69Q49AA0 526 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 FAM78AQ5JUQ0 283 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 ENTPD8Q5MY95 495 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 PDZK1Q5T2W1 519 aa13.6□□□□□ -0.23
HDAC9-208ENST00000417496 CD300LDQ6UXZ3 194 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms