RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 PRR23D2P0DMB1 279 aaPredicted RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 NR2F6P10588 404 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 TYRP14679 529 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 GPX2P18283 190 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 MST1P26927 711 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 HOXA6P31267 233 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 VIPR1P32241 457 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 ACTR1BP42025 376 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 RFX3P48380 749 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 CRYBA2P53672 197 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 WNT4P56705 351 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 SEC61A1P61619 476 aaKnown RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 FAM189BP81408 668 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 HMGCS1Q01581 520 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 MLLT1Q03111 559 aaPredicted RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 ZNF155Q12901 538 aaPredicted RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 HTR4Q13639 388 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 TPBGQ13641 420 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 SMCO1Q147U7 214 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 PON3Q15166 354 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 SEC23BQ15437 767 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 TARBP2Q15633 366 aaKnown RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 C9orf152Q5JTZ5 239 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 ZNF660Q6AZW8 331 aaPredicted RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 CD200R1LQ6Q8B3 271 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 LRRN1Q6UXK5 716 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 RHOUQ7L0Q8 258 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 GOLGA7Q7Z5G4 137 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 LRRC28Q86X40 367 aaPredicted RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 GPSM1Q86YR5 675 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 NPAS4Q8IUM7 802 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 SERPINA12Q8IW75 414 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 DMRTC2Q8IXT2 367 aaPredicted RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 NKAPQ8N5F7 415 aaKnown RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 OR10K1Q8NGX5 313 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 RXFP4Q8TDU9 374 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 TRIM43Q96BQ3 446 aaPredicted RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 LCORQ96JN0 433 aaPredicted RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 SLC6A18Q96N87 628 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 CNTNAP3BQ96NU0 1288 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 SLC2A13Q96QE2 648 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 SPOCK3Q9BQ16 436 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 GSDMCQ9BYG8 508 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 CNTNAP3Q9BZ76 1288 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 ARL6Q9H0F7 186 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 ENKD1Q9H0I2 346 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 QRSL1Q9H0R6 528 aaKnown RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 C20orf85Q9H1P6 137 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 MTG2Q9H4K7 406 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 NSUN3Q9H649 340 aaKnown RBP6.04□□□□□ -1.44
CCNT1-202ENST00000417344 BEX1Q9HBH7 125 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 LRTM1Q9HBL6 345 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 ZFP57Q9NU63 452 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 TAS2R13Q9NYV9 303 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 MGAT4CQ9UBM8 478 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 ZMYM5Q9UJ78 669 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 FBXW11Q9UKB1 542 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 TNFSF13BQ9Y275 285 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 SNX10Q9Y5X0 201 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 BACE2Q9Y5Z0 518 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 ADAMTSL1Q8N6G6 1762 aa6.04□□□□□ -1.44
CCNT1-202ENST00000417344 SHISA3A0PJX4 238 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 MEX3AA1L020 520 aaKnown RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 HCRTO43612 131 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 VEGFDO43915 354 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 MAFKO60675 156 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 PRAF2O60831 178 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SEMA7AO75326 666 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 GATBO75879 557 aaKnown RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 AQP8O94778 261 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 AKR7A3O95154 331 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 PAK4O96013 591 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 POMCP01189 267 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 BCKDHAP12694 445 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 MUC1P15941 1255 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SDHBP21912 280 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 ETV5P41161 510 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 CXCR3P49682 368 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 RAB8AP61006 207 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 RAP2BP61225 183 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 RPS14P62263 151 aaKnown RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 DUSP4Q13115 394 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 GTF2H2Q13888 395 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 HABP2Q14520 560 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 C21orf62-AS1Q17RA5 79 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 GCNT6Q5T4J0 391 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 LCE2AQ5TA79 106 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 GTF2H2CQ6P1K8 395 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 UQCC3Q6UW78 93 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 Q6ZTK2 550 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 IKBIPQ70UQ0 350 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SSX9Q7RTT3 188 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 OAFQ86UD1 273 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 CIR1Q86X95 450 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SIAH3Q8IW03 269 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SLITRK4Q8IW52 837 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 CMIPQ8IY22 773 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SPICQ8N5J4 248 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 AQP11Q8NBQ7 271 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 OR52I1Q8NGK6 324 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms