RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 CHCHD2Q9Y6H1 151 aaPredicted RBP16.58■□□□□ 0.24
SEMA3B-201ENST00000416295 USP9XQ93008 2570 aaPredicted RBP16.58■□□□□ 0.24
SEMA3B-201ENST00000416295 NPIPA5E9PKD4 350 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 UPK1AO00322 258 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 SDHDO14521 159 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 PPM1BO75688 479 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 UNC5CO95185 931 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 PSMG1O95456 288 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 CT45A8P0DMV1 189 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 CT45A9P0DMV2 189 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 FBXW4P57775 412 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 PLGLB1Q02325 96 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 ZNHIT3Q15649 155 aaPredicted RBP16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 EIF2S3LQ2VIR3 472 aaKnown RBP16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 CT45A2Q5DJT8 189 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 LARP4Q71RC2 724 aaKnown RBP eCLIP16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 SIAH3Q8IW03 269 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 PRR22Q8IZ63 422 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 SLC34A3Q8N130 599 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 KRTCAP2Q8N6L1 136 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 PRR7Q8TB68 274 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 OMA1Q96E52 524 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 MAGED4Q96JG8 741 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 C7orf26Q96N11 449 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 BHLHE41Q9C0J9 482 aaPredicted RBP16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 NPIPA1Q9UND3 350 aa16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 USP9YO00507 2555 aaPredicted RBP16.57■□□□□ 0.24
SEMA3B-201ENST00000416295 PRRC2CQ9Y520 2896 aaKnown RBP16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 A0A0G2JMM0 328 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 A0A1W2PPB8 328 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 A0A1W2PRS3 328 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 ANKRD33BA6NCL7 494 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 TTC36A6NLP5 189 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 KIR3DP1A8MWS1 328 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 G3V3Y1 287 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 LAMP1P11279 417 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 KRT20P35900 424 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 RFC3P40938 356 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 DIO3P55073 304 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 KCNJ2P63252 427 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 SRSF11Q05519 484 aaKnown RBP16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 RBPJQ06330 500 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 RNFT1Q5M7Z0 435 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 PRAMEF20Q5VT98 475 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 SPATA19Q7Z5L4 167 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 CAMKMTQ7Z624 323 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 SLC22A16Q86VW1 577 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 SPPL2AQ8TCT8 520 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 DIO2Q92813 273 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 COQ8BQ96D53 544 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 DPY30Q9C005 99 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 TSPAN10Q9H1Z9 355 aaPredicted RBP16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 C3orf14Q9HBI5 128 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 CNOT11Q9UKZ1 510 aaKnown RBP16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 BOKQ9UMX3 212 aaPredicted RBP16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 CROCCQ5TZA2 2017 aa16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 SPTAN1Q13813 2472 aaKnown RBP16.56■□□□□ 0.24
SEMA3B-201ENST00000416295 SPTBN1Q01082 2364 aaKnown RBP16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 UQCRHLA0A096LP55 91 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 A0A1W2PRB8 838 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 ASNA1O43681 348 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 ABCB7O75027 752 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 ABCB1P08183 1280 aaPredicted RBP16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 GP1BBP13224 206 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 EPHA3P29320 983 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 PIGAP37287 484 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 DNASE1L1P49184 302 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 CDK9P50750 372 aaKnown RBP16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 CORO7P57737 925 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 KCNK10P57789 538 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 LSM12Q3MHD2 195 aaKnown RBP16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 NPSR1Q6W5P4 371 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 NUP54Q7Z3B4 507 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 SLC44A2Q8IWA5 706 aaPredicted RBP16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 GHDCQ8N2G8 530 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 CEP70Q8NHQ1 597 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 OR5P2Q8WZ92 322 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 MS4A4EQ96PG1 132 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 DOHHQ9BU89 302 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 DUSP26Q9BV47 211 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 TTTY12Q9BZ98 90 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 WDR55Q9H6Y2 383 aaPredicted RBP16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 IL1RL2Q9HB29 575 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 NEUROD4Q9HD90 331 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 ZNF446Q9NWS9 450 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 NTMQ9P121 344 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 OR10H1Q9Y4A9 318 aa16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.55■□□□□ 0.24
SEMA3B-201ENST00000416295 ESPL1Q14674 2120 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 PINLYPA6NC86 204 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 OR6C70A6NIJ9 312 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 HS6ST1O60243 411 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 NME6O75414 186 aaPredicted RBP16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 GLSO94925 669 aaPredicted RBP16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 AGFG2O95081 481 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 SNX4O95219 450 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 CLNS1AP54105 237 aaKnown RBP16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 PPIAP62937 165 aaKnown RBP16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 MRPS22P82650 360 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms