RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 TBX6O95947 436 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 KLK1P06870 262 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 ANXA4P09525 319 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 ZNF888P0CJ79 500 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 HIST1H1TP22492 207 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 TIA1P31483 386 aaKnown RBP eCLIP12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 BSGP35613 385 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 RPL3P39023 403 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 ATP4BP51164 291 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 MAPK12P53778 367 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 RAB8AP61006 207 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 BTN3A2P78410 334 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 RPS19BP1Q86WX3 136 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 LIX1LQ8IVB5 337 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 AMER2Q8N7J2 671 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 ZFP62Q8NB50 900 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 RNASE6Q93091 150 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 C11orf24Q96F05 449 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 FCRL1Q96LA6 429 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 ZBTB18Q99592 522 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 MACROD1Q9BQ69 325 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 KLHL31Q9H511 634 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 LYARQ9NX58 379 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 PHF3Q92576 2039 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 CLCA1A8K7I4 914 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 NPIPA2E9PIF3 369 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 NPIPA3F8WFD2 350 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 H0YIG0 161 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 GALR3O60755 368 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 SCELO95171 688 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 NSA2O95478 260 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 BCKDHAP12694 445 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 PRPS1L1P21108 318 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 TACR1P25103 407 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 ATP5A1P25705 553 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 TLX1P31314 330 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 TRHRP34981 398 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 MRPL19P49406 292 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 ST13P50502 369 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 ASCL1P50553 236 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 HLCSP50747 726 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 ZNF763Q0D2J5 394 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 SLAMF1Q13291 335 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 SQLEQ14534 574 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 HEPACAMQ14CZ8 416 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 TERF2Q15554 542 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 FBXL19-AS1Q494R0 122 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 DEFB134Q4QY38 66 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 RIPPLY2Q5TAB7 128 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 LANCL3Q6ZV70 420 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 IKBIPQ70UQ0 350 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 UBE3DQ7Z6J8 389 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 YTHDF3Q7Z739 585 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 SULF2Q8IWU5 870 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 MIER2Q8N344 545 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 ACOT4Q8N9L9 421 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 C7orf57Q8NEG2 295 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 ZCCHC10Q8TBK6 192 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 PIGTQ969N2 578 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 PRPF18Q99633 342 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 FAIM2Q9BWQ8 316 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 LYRM4Q9HD34 91 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 SDR39U1Q9NRG7 319 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 PNPLA3Q9NST1 481 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 AIG1Q9NVV5 245 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 PHF11Q9UIL8 331 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 FAM215AQ9Y5M1 114 aa12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 SNRNP200O75643 2136 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-204ENST00000414781 TUBAL3A6NHL2 446 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 PEX1O43933 1283 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 WDR1O75083 606 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 PDE9AO76083 593 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 STATHP02808 62 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 FAM58BPP0C7Q3 252 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 G6PDP11413 515 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 IL10P22301 178 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 TPP2P29144 1249 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 RFC3P40938 356 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 EFNA3P52797 238 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 CLNS1AP54105 237 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 CLDN8P56748 225 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 MINDY4Q4G0A6 757 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 PDCD4Q53EL6 469 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 ZNF468Q5VIY5 522 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 ZNF585AQ6P3V2 769 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 R3HCC1LQ7Z5L2 792 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 ANKRD37Q7Z713 158 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 MTDHQ86UE4 582 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 GPR180Q86V85 440 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 KIF18BQ86Y91 864 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 TMEM132CQ8N3T6 1108 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 LIX1Q8N485 282 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 GLB1L3Q8NCI6 653 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 LPAR4Q99677 370 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 C1orf50Q9BV19 199 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 DPY30Q9C005 99 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 BRINP2Q9C0B6 783 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 CDCP1Q9H5V8 836 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 SYNPO2LQ9H987 977 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 WDR41Q9HAD4 459 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms