RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PTGR1Q14914 329 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 NNATQ16517 81 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 CES4AQ5XG92 561 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 LYPD8Q6UX82 237 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 ZNF551Q7Z340 670 aaPredicted RBP13.54□□□□□ -0.24
CHD1-202ENST00000414220 SZRD1Q7Z422 152 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 SPATA19Q7Z5L4 167 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 PIWIL2Q8TC59 973 aaKnown RBP13.54□□□□□ -0.24
CHD1-202ENST00000414220 ZNF75CPQ92670 426 aaPredicted RBP13.54□□□□□ -0.24
CHD1-202ENST00000414220 OMA1Q96E52 524 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 BTBD9Q96Q07 612 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 BHLHE41Q9C0J9 482 aaPredicted RBP13.54□□□□□ -0.24
CHD1-202ENST00000414220 METTL7AQ9H8H3 244 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 Q9N2J8 555 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 INTS9Q9NV88 658 aaKnown RBP13.54□□□□□ -0.24
CHD1-202ENST00000414220 GIMAP2Q9UG22 337 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 PCDHGB4Q9UN71 923 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 G3V3Y1 287 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 UPK1AO00322 258 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 EMC8O43402 210 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 HS6ST1O60243 411 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 CDC40O60508 579 aaKnown RBP eCLIP13.53□□□□□ -0.24
CHD1-202ENST00000414220 SOX30O94993 753 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 PIGAP37287 484 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 DNASE1L1P49184 302 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 CLNS1AP54105 237 aaKnown RBP13.53□□□□□ -0.24
CHD1-202ENST00000414220 PRKAG1P54619 331 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 FBXW4P57775 412 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 KCNK10P57789 538 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 CYP27C1Q4G0S4 372 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 HSP90B2PQ58FF3 399 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 TTMPQ5BVD1 217 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 NXNQ6DKJ4 435 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 SLC30A6Q6NXT4 461 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 MTFR2Q6P444 385 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 ZCCHC12Q6PEW1 402 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 BHLHB9Q6PI77 547 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 WDR75Q8IWA0 830 aaKnown RBP13.53□□□□□ -0.24
CHD1-202ENST00000414220 SLC44A2Q8IWA5 706 aaPredicted RBP13.53□□□□□ -0.24
CHD1-202ENST00000414220 PRR22Q8IZ63 422 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 OR2L13Q8N349 312 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 FAM109AQ8N4B1 249 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 SPPL2AQ8TCT8 520 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 OR5P2Q8WZ92 322 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 CIDECQ96AQ7 238 aaPredicted RBP13.53□□□□□ -0.24
CHD1-202ENST00000414220 ZNF597Q96LX8 424 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 JSRP1Q96MG2 331 aaPredicted RBP13.53□□□□□ -0.24
CHD1-202ENST00000414220 VSTM2LQ96N03 204 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 COL21A1Q96P44 957 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 DUSP26Q9BV47 211 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 TTTY12Q9BZ98 90 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 TSPAN10Q9H1Z9 355 aaPredicted RBP13.53□□□□□ -0.24
CHD1-202ENST00000414220 ANKRA2Q9H9E1 313 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 SH2D2AQ9NP31 389 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 ZFP64Q9NPA5 681 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 DEPPQ9NTK1 212 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 SUCOQ9UBS9 1254 aaKnown RBP13.53□□□□□ -0.24
CHD1-202ENST00000414220 MARCOQ9UEW3 520 aaPredicted RBP13.53□□□□□ -0.24
CHD1-202ENST00000414220 DTX4Q9Y2E6 619 aa13.53□□□□□ -0.24
CHD1-202ENST00000414220 CHCHD2Q9Y6H1 151 aaPredicted RBP13.53□□□□□ -0.24
CHD1-202ENST00000414220 TRGV8A0A0C4DH27 118 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 OR6C70A6NIJ9 312 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 PRRG2O14669 202 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 CFLARO15519 480 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 KCNH1O95259 989 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 ABCB1P08183 1280 aaPredicted RBP13.52□□□□□ -0.25
CHD1-202ENST00000414220 KRT16P08779 473 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 STSP08842 583 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 RFC3P40938 356 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 FRKP42685 505 aaPredicted RBP13.52□□□□□ -0.25
CHD1-202ENST00000414220 PRIM2P49643 509 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 CLK3P49761 638 aaKnown RBP13.52□□□□□ -0.25
CHD1-202ENST00000414220 PNLIPRP2P54317 469 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 C21orf58P58505 322 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 OCRLQ01968 901 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 DUSP8Q13202 625 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 SNTA1Q13424 505 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 SLC10A1Q14973 349 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 DECR1Q16698 335 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 PRSS53Q2L4Q9 553 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 HYAL4Q2M3T9 481 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 DPY19L1Q2PZI1 675 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 PGS1Q32NB8 556 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 SPDYE7PQ495Y7 208 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 C4orf17Q53FE4 359 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 ZNF385BQ569K4 471 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 ANXA8L1Q5VT79 327 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 PRAMEF20Q5VT98 475 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 OGFOD2Q6N063 350 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 ARHGAP11AQ6P4F7 1023 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 TMEM64Q6YI46 380 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 LARP4Q71RC2 724 aaKnown RBP eCLIP13.52□□□□□ -0.25
CHD1-202ENST00000414220 SIAH3Q8IW03 269 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 CDRT4Q8N9R6 151 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 NUP43Q8NFH3 380 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 OR7A2PQ8NGA2 310 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 MOAP1Q96BY2 351 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 COQ8BQ96D53 544 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 ZBTB18Q99592 522 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 LDAHQ9H6V9 325 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms