RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 KDRP35968 1356 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 MSH6P52701 1360 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 ARPC1BO15143 372 aaKnown RBP2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 OLFM2O95897 454 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 FCGR3AP08637 254 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 GP9P14770 177 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 ATP6V1B1P15313 513 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 RPL34P49207 117 aaKnown RBP2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 TKTL1P51854 596 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 NDST1P52848 882 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 GEMP55040 296 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 HERV-K104P63124 156 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 ACTN3Q08043 901 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 RPA4Q13156 261 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 EXOSC7Q15024 291 aaKnown RBP2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 ANKRD55Q3KP44 614 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 LINC00242Q5T6M2 205 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 DDI2Q5TDH0 399 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 NKAIN2Q5VXU1 208 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 RTL6Q6ICC9 239 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 BAIAP2L2Q6UXY1 529 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 SPC24Q8NBT2 197 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 RDH11Q8TC12 318 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 FBXO25Q8TCJ0 367 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 ST7LQ8TDW4 575 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 AGAP11Q8TF27 550 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 KRT35Q92764 455 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 RAB39BQ96DA2 213 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 RPGRIP1Q96KN7 1286 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 CXorf58Q96LI9 332 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 C19orf43Q9BQ61 176 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 ST6GALNAC5Q9BVH7 336 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 FUNDC2Q9BWH2 189 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 TRPV6Q9H1D0 765 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 SLC25A19Q9HC21 320 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 AMBNQ9NP70 447 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 PIGVQ9NUD9 493 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 HMG20BQ9P0W2 317 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 VPS54Q9P1Q0 977 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 MLXQ9UH92 298 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 AK9Q5TCS8 1911 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 DCCP43146 1447 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 FAM205AQ6ZU69 1335 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 RREB1Q92766 1687 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 ROBO1Q9Y6N7 1651 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 KBTBD11O94819 623 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 VENTXO95231 258 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 APRTP07741 180 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 MBL2P11226 248 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 UGT1A6P19224 532 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 TNFRSF4P43489 277 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 NSFP46459 744 aaKnown RBP2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 KLF5Q13887 457 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 HFEQ30201 348 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 KRT71Q3SY84 523 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 UNC50Q53HI1 259 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 CDC42EP5Q6NZY7 148 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 SLC22A16Q86VW1 577 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 HPS6Q86YV9 775 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 HIPK1Q86Z02 1210 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 HSCBQ8IWL3 235 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 SPEM1Q8N4L4 309 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 EXOC6Q8TAG9 804 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 P3H4Q92791 437 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 SNX21Q969T3 373 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 ATP6V0BQ99437 205 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 JPH2Q9BR39 696 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 TTYH2Q9BSA4 534 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 ZBP1Q9H171 429 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 PRR34Q9NV39 138 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 GPR83Q9NYM4 423 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 AKAP7Q9P0M2 348 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 TRIM10Q9UDY6 481 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 TUBGCP4Q9UGJ1 667 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 NARFQ9UHQ1 456 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 TRMT6Q9UJA5 497 aaKnown RBP2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 APPL1Q9UKG1 709 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 TEX264Q9Y6I9 313 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 DOT1LQ8TEK3 1739 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 CRB1P82279 1406 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 TTC21BQ7Z4L5 1316 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 FANCIQ9NVI1 1328 aa2.92□□□□□ -1.94
HMGB1P11-201ENST00000413899 C1orf167Q5SNV9 1468 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 SBNO1A3KN83 1393 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 RTL1A6NKG5 1358 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 ARHGEF10O15013 1369 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 AHDC1Q5TGY3 1603 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 LTBP4Q8N2S1 1624 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 A0A0A6YYD4 124 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 E9PAM4 449 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 MCF2LO15068 1137 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 NME2P1O60361 137 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 GMNNO75496 209 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 CXCL14O95715 111 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 IGHG3P01860 377 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 AREGP15514 252 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 ZNF18P17022 549 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 PPP2R1BP30154 601 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 MATKP42679 507 aa2.91□□□□□ -1.94
HMGB1P11-201ENST00000413899 GSTO1P78417 241 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms