RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ERAL1O75616 437 aaKnown RBP13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 CHRM4P08173 479 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 CXCL3P19876 107 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 DUSP2Q05923 314 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 PCDH1Q08174 1060 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 GPR176Q14439 515 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 GPR162Q16538 588 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 OCLNQ16625 522 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 TCTE3Q8IZS6 198 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 TMEM43Q9BTV4 400 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 C1QTNF6Q9BXI9 259 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 MKRN2Q9H000 416 aaKnown RBP13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 SLC28A3Q9HAS3 691 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 SLC25A13Q9UJS0 675 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 HS3ST2Q9Y278 367 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 PPIL1Q9Y3C6 166 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 TCF20Q9UGU0 1960 aaKnown RBP13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 A0A087WUU8 490 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 SOD1P00441 154 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 PRKAR1AP10644 381 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 HLA-DMAP28067 261 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 ATP6V1E1P36543 226 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 EVX1P49640 407 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 LASP1Q14847 261 aaKnown RBP13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 HIST2H2AA3Q6FI13 130 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 ANKRD54Q6NXT1 300 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 HSDL2Q6YN16 418 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 ESPNLQ6ZVH7 1005 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 PEX5LQ8IYB4 626 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 NEURL3Q96EH8 262 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 LMLNQ96KR4 655 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 FUZQ9BT04 418 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 ASF1AQ9Y294 204 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 KPNA3O00505 521 aaPredicted RBP13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 LATO43561 262 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 C1QBP02746 253 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 ELFN1P0C7U0 828 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 RECQLP46063 649 aaPredicted RBP13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 BNC1Q01954 994 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 FCRLBQ6BAA4 426 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 VASNQ6EMK4 673 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 SMPDL3AQ92484 453 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 TRIM63Q969Q1 353 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 OMA1Q96E52 524 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 GON7Q9BXV9 100 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 POLDIP3Q9BY77 421 aaKnown RBP13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 LHX9Q9NQ69 397 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 SPG21Q9NZD8 308 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 TEX28O15482 410 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 EEF1E1O43324 174 aaKnown RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 TOXO94900 526 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 RPLP2P05387 115 aaKnown RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 POLR2EP19388 210 aaKnown RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 PRLHRP49683 370 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 SRP54P61011 504 aaKnown RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 ZNF155Q12901 538 aaPredicted RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 TMEM91Q6ZNR0 172 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 PRR23CQ6ZRP0 262 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 DGLUCYQ7Z3D6 616 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 ADCK2Q7Z695 626 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 VRK2Q86Y07 508 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 ZNF547Q8IVP9 402 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 MORN4Q8NDC4 146 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 OR9A1PQ8NGU1 263 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 OR4Q3Q8NH05 313 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 DACT3Q96B18 629 aaPredicted RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 TRMT2BQ96GJ1 504 aaKnown RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 ING3Q9NXR8 418 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 ENOPH1Q9UHY7 261 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 MRPS7Q9Y2R9 242 aaKnown RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 REV3LO60673 3130 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 MAGEB4O15481 346 aaPredicted RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 TRAPPC2P0DI81 140 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 TRAPPC2BP0DI82 140 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 SLC1A3P43003 542 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 CLDN20P56880 219 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 MRPL28Q13084 256 aaKnown RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 TOR2AQ5JU69 321 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 NKAIN4Q8IVV8 208 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 FGF11Q92914 225 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 DDX31Q9H8H2 851 aaKnown RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 ZCCHC3Q9NUD5 404 aaKnown RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 MRPL15Q9P015 296 aaKnown RBP13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 NDOR1Q9UHB4 597 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 MGAT4AQ9UM21 535 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 BACE2Q9Y5Z0 518 aa13.72□□□□□ -0.21
SEMA3F-202ENST00000413852 CCL16O15467 120 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 EIF4EP06730 217 aaKnown RBP13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 ACP2P11117 423 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 DDCP20711 480 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 SHC1P29353 583 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 TRHRP34981 398 aaPredicted RBP13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 TRIM23P36406 574 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 PNLIPRP1P54315 467 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 CDH11P55287 796 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 CDK5Q00535 292 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 FUT5Q11128 374 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 PXDC1Q5TGL8 231 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 SMARCD3Q6STE5 483 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 ADIPOR2Q86V24 386 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms