RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 ESAMQ96AP7 390 aa8.67□□□□□ -1.02
RFFL-203ENST00000413582 ARL8AQ96BM9 186 aa8.67□□□□□ -1.02
RFFL-203ENST00000413582 CTHRC1Q96CG8 243 aa8.67□□□□□ -1.02
RFFL-203ENST00000413582 MED18Q9BUE0 208 aa8.67□□□□□ -1.02
RFFL-203ENST00000413582 OR2B2Q9GZK3 357 aa8.67□□□□□ -1.02
RFFL-203ENST00000413582 CENPHQ9H3R5 247 aa8.67□□□□□ -1.02
RFFL-203ENST00000413582 CNOT10Q9H9A5 744 aaKnown RBP8.67□□□□□ -1.02
RFFL-203ENST00000413582 ZNF701Q9NV72 531 aaPredicted RBP8.67□□□□□ -1.02
RFFL-203ENST00000413582 MKS1Q9NXB0 559 aa8.67□□□□□ -1.02
RFFL-203ENST00000413582 MS4A12Q9NXJ0 267 aa8.67□□□□□ -1.02
RFFL-203ENST00000413582 PHF11Q9UIL8 331 aa8.67□□□□□ -1.02
RFFL-203ENST00000413582 MTO1Q9Y2Z2 717 aaKnown RBP8.67□□□□□ -1.02
RFFL-203ENST00000413582 A0A1W2PS29 197 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 HMX2A2RU54 273 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 SMIM23A6NLE4 172 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 TRIM49D1C9J1S8 452 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 PLPP1O14494 284 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 HCRTR2O43614 444 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 STK16O75716 305 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 SMNDC1O75940 238 aaKnown RBP eCLIP8.66□□□□□ -1.02
RFFL-203ENST00000413582 GPR75O95800 540 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 TGFB1P01137 390 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 COL6A2P12110 1019 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 CHMP24386 653 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 ABCD3P28288 659 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 CRABP2P29373 138 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 GALNSP34059 522 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 GCKP35557 465 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 UGT2B10P36537 528 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 CD79BP40259 229 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 PTGDSP41222 190 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 CASP2P42575 452 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 MAGEA12P43365 314 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 EEF1A1P68104 462 aaKnown RBP8.66□□□□□ -1.02
RFFL-203ENST00000413582 RPP38P78345 283 aaKnown RBP8.66□□□□□ -1.02
RFFL-203ENST00000413582 SLC18A2Q05940 514 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 PCDH1Q08174 1060 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 CHIT1Q13231 466 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 SLAMF1Q13291 335 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 GAB1Q13480 694 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 LAPTM5Q13571 262 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 SETDB1Q15047 1291 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 TBCCQ15814 346 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 TTMPQ5BVD1 217 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 EEF1A1P5Q5VTE0 462 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 KHDRBS2Q5VWX1 349 aaKnown RBP8.66□□□□□ -1.02
RFFL-203ENST00000413582 HEPHL1Q6MZM0 1159 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 TMEM81Q6P7N7 255 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 VWA1Q6PCB0 445 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 ZNF474Q6S9Z5 364 aaPredicted RBP8.66□□□□□ -1.02
RFFL-203ENST00000413582 ENPP6Q6UWR7 440 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 ZNF550Q7Z398 422 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 GPR180Q86V85 440 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 EXOC3L1Q86VI1 746 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 GRAMD2AQ8IUY3 354 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 LAS2Q8IYD9 372 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 ZCCHC7Q8N3Z6 543 aaKnown RBP8.66□□□□□ -1.02
RFFL-203ENST00000413582 OR1J4Q8NGS1 313 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 UCN3Q969E3 161 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 ADIPOR1Q96A54 375 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 TSPAN17Q96FV3 270 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 ZNF717Q9BY31 904 aaPredicted RBP8.66□□□□□ -1.02
RFFL-203ENST00000413582 OR51B5Q9H339 312 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 METTL7AQ9H8H3 244 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 CAB39LQ9H9S4 337 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 CXorf21Q9HAI6 301 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 POPDC3Q9HBV1 291 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 SERHLQ9NQF3 203 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 TBK1Q9UHD2 729 aa8.66□□□□□ -1.02
RFFL-203ENST00000413582 CCDC189A1A4V9 331 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 GLOD5A6NK44 160 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 WASHC1A8K0Z3 465 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 PLOD2O00469 737 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 TMPRSS11DO60235 418 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 AIFM1O95831 613 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 TGM6O95932 706 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 CRHP06850 196 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 ABCB1P08183 1280 aaPredicted RBP8.65□□□□□ -1.02
RFFL-203ENST00000413582 GSTA1P08263 222 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 CT62P0C5K7 136 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 NR2F6P10588 404 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 PCNAP12004 261 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 STMN1P16949 149 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 ZNF708P17019 499 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 TYK2P29597 1187 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 SERPINB1P30740 379 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 TLX1P31314 330 aaPredicted RBP8.65□□□□□ -1.02
RFFL-203ENST00000413582 BUD31P41223 144 aaPredicted RBP8.65□□□□□ -1.02
RFFL-203ENST00000413582 CCT5P48643 541 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 SERPINB8P50452 374 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 LHX2P50458 406 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 RAP1GDS1P52306 607 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 SLC12A2P55011 1212 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 NR1H2P55055 460 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 ATP5J2P56134 94 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 GFRA1P56159 465 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 CLDN18P56856 261 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 NRG3P56975 720 aa8.65□□□□□ -1.02
RFFL-203ENST00000413582 MAGOHP61326 146 aaKnown RBP8.65□□□□□ -1.02
RFFL-203ENST00000413582 IRF8Q02556 426 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms