RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TRIM64A6NGJ6 449 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 TRIM64BA6NI03 449 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 OR7A17O14581 309 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 CASKO14936 926 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 ZSCAN12O43309 604 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 SIX3O95343 332 aaPredicted RBP11.01□□□□□ -0.65
LIMS2-210ENST00000413578 KLK1P06870 262 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 DRD5P21918 477 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 PCSK6P29122 969 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 PPICP45877 212 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 EMDP50402 254 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 B3GALT5-AS1P59052 145 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 MRPS25P82663 173 aaKnown RBP11.01□□□□□ -0.65
LIMS2-210ENST00000413578 DUSP2Q05923 314 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 EXOSC7Q15024 291 aaKnown RBP11.01□□□□□ -0.65
LIMS2-210ENST00000413578 ACKR1Q16570 336 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 SCIMPQ6UWF3 145 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 YTHDF3Q7Z739 585 aaKnown RBP11.01□□□□□ -0.65
LIMS2-210ENST00000413578 IFNEQ86WN2 208 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 PLCZ1Q86YW0 608 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 CTAGE3PQ8IX95 158 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 PPM1NQ8N819 430 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 OR52B6Q8NGF0 335 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 OR14L1PQ8NHC6 308 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 TRPC4APQ8TEL6 797 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 LRRC1Q9BTT6 524 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 BDH2Q9BUT1 245 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 MRPL1Q9BYD6 325 aaKnown RBP11.01□□□□□ -0.65
LIMS2-210ENST00000413578 TAS2R10Q9NYW0 307 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 EHD3Q9NZN3 535 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 KLRF1Q9NZS2 232 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 FBXL2Q9UKC9 423 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 ADAM21Q9UKJ8 722 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 PLLPQ9Y342 182 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 MRPS18CQ9Y3D5 142 aaKnown RBP11.01□□□□□ -0.65
LIMS2-210ENST00000413578 PCDHA9Q9Y5H5 950 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 WIF1Q9Y5W5 379 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 EXPH5Q8NEV8 1989 aa11.01□□□□□ -0.65
LIMS2-210ENST00000413578 C1orf226A1L170 272 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 FRG2CA6NGY1 282 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 OR6C70A6NIJ9 312 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 ZIC3O60481 467 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 CLDN9O95484 217 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 CGAP01215 116 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 C2P06681 752 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 GFAPP14136 432 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 CPOXP36551 454 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 CD79BP40259 229 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 GAS1P54826 345 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 CLDN15P56746 228 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 TRAF3Q13114 568 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 NAB1Q13506 487 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 ACAP2Q15057 778 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 BCL2A1Q16548 175 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 FAM83EQ2M2I3 478 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 TRMT12Q53H54 448 aaKnown RBP11□□□□□ -0.65
LIMS2-210ENST00000413578 C10orf62Q5T681 223 aaPredicted RBP11□□□□□ -0.65
LIMS2-210ENST00000413578 C6orf163Q5TEZ5 329 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 FRG2Q64ET8 278 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 VWA1Q6PCB0 445 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 AAGABQ6PD74 315 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 C22orf34Q6ZV56 151 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 CCDC91Q7Z6B0 441 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 GRAMD2AQ8IUY3 354 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 METTL4Q8N3J2 472 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 SPATA3Q8NHX4 192 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 RDH11Q8TC12 318 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 SLC35A4Q96G79 324 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 ZNF681Q96N22 645 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 CDK15Q96Q40 435 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 HS3ST6Q96QI5 342 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 FRG2BQ96QU4 278 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 CCL19Q99731 98 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 PIGQQ9BRB3 760 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 ERP44Q9BS26 406 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 NTMT1Q9BV86 223 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 GSX2Q9BZM3 304 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 KLHL28Q9NXS3 571 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 HEY2Q9UBP5 337 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 TRPS1Q9UHF7 1281 aa11□□□□□ -0.65
LIMS2-210ENST00000413578 GPR55Q9Y2T6 319 aaPredicted RBP11□□□□□ -0.65
LIMS2-210ENST00000413578 TNPO3Q9Y5L0 923 aaKnown RBP11□□□□□ -0.65
LIMS2-210ENST00000413578 A0A087X1B8 175 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 INAFM1C9JVW0 142 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 CTAGE8P0CG41 777 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 PAX1P15863 534 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 FPR1P21462 350 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 UGT2B10P36537 528 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 FEN1P39748 380 aaKnown RBP10.99□□□□□ -0.65
LIMS2-210ENST00000413578 KIR2DL2P43627 348 aaPredicted RBP10.99□□□□□ -0.65
LIMS2-210ENST00000413578 GUCY2DQ02846 1103 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 GALNT1Q10472 559 aaPredicted RBP10.99□□□□□ -0.65
LIMS2-210ENST00000413578 GUSBP1Q15486 140 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 LTB4RQ15722 352 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 GGTA1PQ4G0N0 100 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 CCNYL2Q5T2Q4 361 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 C20orf204Q6ZNR8 217 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 CXXC5Q7LFL8 322 aaKnown RBP10.99□□□□□ -0.65
LIMS2-210ENST00000413578 PAGE2Q7Z2X7 111 aa10.99□□□□□ -0.65
LIMS2-210ENST00000413578 COMMD6Q7Z4G1 85 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms