RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 C19orf53Q9UNZ5 99 aaPredicted RBP7.11□□□□□ -1.27
CPSF4-202ENST00000412686 COPG1Q9Y678 874 aaKnown RBP7.11□□□□□ -1.27
CPSF4-202ENST00000412686 SPENQ96T58 3664 aaKnown RBP7.1□□□□□ -1.27
CPSF4-202ENST00000412686 NCKAP5O14513 1909 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 A0A087WV62 115 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 GXYLT2A0PJZ3 443 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 FRG2CA6NGY1 282 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 PLOD2O00469 737 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 CFLARO15519 480 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 ATP8B1O43520 1251 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 SCN2BO60939 215 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 COQ9O75208 318 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 UGT2B11O75310 529 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 ERN1O75460 977 aaKnown RBP7.1□□□□□ -1.27
CPSF4-202ENST00000412686 ACP2P11117 423 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 ABCD3P28288 659 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 PIGAP37287 484 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 RPL3P39023 403 aaKnown RBP7.1□□□□□ -1.27
CPSF4-202ENST00000412686 ZFP36L2P47974 494 aaKnown RBP7.1□□□□□ -1.27
CPSF4-202ENST00000412686 C21orf58P58505 322 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 HBA1P69905 142 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 NTRK2Q16620 822 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 FAM174BQ3ZCQ3 159 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 CGB2Q6NT52 195 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 RPUSD3Q6P087 351 aaKnown RBP7.1□□□□□ -1.27
CPSF4-202ENST00000412686 BLOC1S3Q6QNY0 202 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 OPN5Q6U736 354 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 FAM180AQ6UWF9 173 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 RTL4Q6ZR62 310 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 SPATA19Q7Z5L4 167 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 CAMKMTQ7Z624 323 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 GALNT10Q86SR1 603 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 LRRC34Q8IZ02 419 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 ARFGAP2Q8N6H7 521 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 TMEM178AQ8NBL3 297 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 FAM13CQ8NE31 585 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 OR5AK3PQ8NH89 298 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 ACTRT2Q8TDY3 377 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 TMBIM1Q969X1 311 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 TP53INP1Q96A56 240 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 TMEM125Q96AQ2 219 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 FAM120BQ96EK7 910 aaKnown RBP7.1□□□□□ -1.27
CPSF4-202ENST00000412686 C16orf58Q96GQ5 468 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 LCORQ96JN0 433 aaPredicted RBP7.1□□□□□ -1.27
CPSF4-202ENST00000412686 BTBD9Q96Q07 612 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 NODALQ96S42 347 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 BARD1Q99728 777 aaKnown RBP7.1□□□□□ -1.27
CPSF4-202ENST00000412686 BHLHE41Q9C0J9 482 aaPredicted RBP7.1□□□□□ -1.27
CPSF4-202ENST00000412686 CLMPQ9H6B4 373 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 PROK2Q9HC23 129 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 SH2D2AQ9NP31 389 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 NPHS2Q9NP85 383 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 TIMMDC1Q9NPL8 285 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 TCF7L2Q9NQB0 619 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 ACSS1Q9NUB1 689 aaPredicted RBP7.1□□□□□ -1.27
CPSF4-202ENST00000412686 ZCCHC3Q9NUD5 404 aaKnown RBP7.1□□□□□ -1.27
CPSF4-202ENST00000412686 FGFR1OP2Q9NVK5 253 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 FLRT3Q9NZU0 649 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 DCTN4Q9UJW0 460 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 CFL2Q9Y281 166 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 GPR55Q9Y2T6 319 aaPredicted RBP7.1□□□□□ -1.27
CPSF4-202ENST00000412686 HRH3Q9Y5N1 445 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 SNX8Q9Y5X2 465 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 NPFFR2Q9Y5X5 522 aa7.1□□□□□ -1.27
CPSF4-202ENST00000412686 SMG1Q96Q15 3661 aaKnown RBP7.09□□□□□ -1.27
CPSF4-202ENST00000412686 ASPDHA6ND91 283 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 C17orf51A8MQB3 221 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 FAM166BA8MTA8 275 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 NPIPA5E9PKD4 350 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 J3QKU1 62 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 POLR3GO15318 223 aaPredicted RBP7.09□□□□□ -1.27
CPSF4-202ENST00000412686 PEX1O43933 1283 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 PPM1BO75688 479 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 BCAS2O75934 225 aaPredicted RBP7.09□□□□□ -1.27
CPSF4-202ENST00000412686 CPSF4O95639 269 aaKnown RBP7.09□□□□□ -1.27
CPSF4-202ENST00000412686 DRD5P21918 477 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 GNLYP22749 145 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 SOAT1P35610 550 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 CDKN2CP42773 168 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 KIR3DL1P43629 444 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 PPICP45877 212 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 RFX3P48380 749 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 TDGF1P3P51864 188 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 GYS2P54840 703 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 CASP9P55211 416 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 KCNK10P57789 538 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 RPS26P62854 115 aaKnown RBP7.09□□□□□ -1.27
CPSF4-202ENST00000412686 HSF1Q00613 529 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 PLCXD2Q0VAA5 305 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 GAB1Q13480 694 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 LASP1Q14847 261 aaKnown RBP7.09□□□□□ -1.27
CPSF4-202ENST00000412686 MLC1Q15049 377 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 RPS6KA2Q15349 733 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 DUSP5Q16690 384 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 PDCD4Q53EL6 469 aaKnown RBP7.09□□□□□ -1.27
CPSF4-202ENST00000412686 ZNF324BQ6AW86 544 aaPredicted RBP7.09□□□□□ -1.27
CPSF4-202ENST00000412686 PAOXQ6QHF9 649 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 DNAJC14Q6Y2X3 702 aaPredicted RBP7.09□□□□□ -1.27
CPSF4-202ENST00000412686 ACAD11Q709F0 780 aa7.09□□□□□ -1.27
CPSF4-202ENST00000412686 SLC44A2Q8IWA5 706 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms