RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 POM121L1PQ3SYA9 428 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 GRHL2Q6ISB3 625 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 MTFR2Q6P444 385 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 TMEM220Q6QAJ8 160 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 HMGN2P46Q86SG4 172 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 CNOT9Q92600 299 aaKnown RBP13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 WDR26Q9H7D7 661 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 BRF2Q9HAW0 419 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 M0R3H8 397 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 MRPL3P09001 348 aaKnown RBP13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 ARAFP10398 606 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 NFYAP23511 347 aaPredicted RBP13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 ETV5P41161 510 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 GCGRP47871 477 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 KIAA1024LP59773 190 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 MINDY4Q4G0A6 757 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 TMEM69Q5SWH9 247 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 AGMOQ6ZNB7 445 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 OR4M1Q8NGD0 313 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 LKAAEAR1Q8TD35 194 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 UCN3Q969E3 161 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 ZNF578Q96N58 590 aaPredicted RBP13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 XCR1P46094 333 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 RAB5BP61020 215 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 FLI1Q01543 452 aaPredicted RBP13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 ZNF79Q15937 498 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 OCLNQ16625 522 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 COX20Q5RI15 118 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 AFMIDQ63HM1 303 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 UNC5DQ6UXZ4 953 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 GPR155Q7Z3F1 870 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 LHFPL5Q8TAF8 219 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 FERD3LQ96RJ6 166 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 TMEM175Q9BSA9 504 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 RETREG1Q9H6L5 497 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 NLGN3Q9NZ94 848 aa13.17□□□□□ -0.3
CLTCL1-201ENST00000412649 NAP1L6A6NFF2 107 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 STK25O00506 426 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 AXIN1O15169 862 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 FZD7O75084 574 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 ALPPL2P10696 532 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 RBM34P42696 430 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 SLC1A3P43003 542 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 CRYBB2P43320 205 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 MBTPS1Q14703 1052 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 PRAMEF17Q5VTA0 474 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 PODNL1Q6PEZ8 512 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 NUDT13Q86X67 352 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 SLC44A3Q8N4M1 653 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 OR4F15Q8NGB8 312 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 OR6M1Q8NGM8 313 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 C16orf78Q8WTQ4 265 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 SORCS1Q8WY21 1168 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 TMEM30AQ9NV96 361 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 KLHL9Q9P2J3 617 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 ABCA3Q99758 1704 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 LINC00862A6NCI5 91 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 LGI1O95970 557 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 PAK4O96013 591 aaPredicted RBP13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 AOAHP28039 575 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 MEF2AQ02078 507 aaPredicted RBP13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 FGL2Q14314 439 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 SEC23BQ15437 767 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 SLC30A6Q6NXT4 461 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 MS4A15Q8N5U1 240 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 BBS10Q8TAM1 723 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 MARVELD1Q9BSK0 173 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 MED18Q9BUE0 208 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 ZNF3P17036 446 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 ELK1P19419 428 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 CCR6P51684 374 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 MAP4K2Q12851 820 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 ATXN7L3Q14CW9 347 aaPredicted RBP13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 TAF8Q7Z7C8 310 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 SIAH3Q8IW03 269 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 UPRTQ96BW1 309 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 ZBED3Q96IU2 234 aaPredicted RBP13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 C7orf34Q96L11 122 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 ZNF354BQ96LW1 612 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 CD180Q99467 661 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 DDOQ99489 341 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 ALG8Q9BVK2 526 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 SUV39H2Q9H5I1 410 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 TRPV4Q9HBA0 871 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 TOR1AO14656 332 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 ELFN1P0C7U0 828 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 PREPP48147 710 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 TMED4Q7Z7H5 227 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 LINC01465Q8N7H1 131 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 OR5M3Q8NGP4 307 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 FAM46AQ96IP4 442 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 MFFQ9GZY8 342 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 RNF181Q9P0P0 153 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 SPACA6W5XKT8 324 aa13.16□□□□□ -0.3
CLTCL1-201ENST00000412649 ADAMTSL1Q8N6G6 1762 aa13.15□□□□□ -0.3
CLTCL1-201ENST00000412649 TMEM129A0AVI4 362 aa13.15□□□□□ -0.3
CLTCL1-201ENST00000412649 RCBTB2O95199 551 aa13.15□□□□□ -0.3
CLTCL1-201ENST00000412649 IDSP22304 550 aa13.15□□□□□ -0.3
CLTCL1-201ENST00000412649 PTPN6P29350 595 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms