RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 MAGEA8P43361 318 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 PRIM2P49643 509 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 NR0B1P51843 470 aaKnown RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 STX1BP61266 288 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 FOXK1P85037 733 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 PSG6Q00889 435 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 TLE1Q04724 770 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 PLCXD2Q0VAA5 305 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 HSPB3Q12988 150 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 DUSP8Q13202 625 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 EFR3AQ14156 821 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 EXOSC7Q15024 291 aaKnown RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 EXOSC6Q5RKV6 272 aaKnown RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 ZNF468Q5VIY5 522 aaPredicted RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 METTL21CQ5VZV1 264 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 ZNF324BQ6AW86 544 aaPredicted RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 TMEM107Q6UX40 140 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 PRICKLE2Q7Z3G6 844 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 GALNTL5Q7Z4T8 443 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 ATCAYQ86WG3 371 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 ZNF227Q86WZ6 799 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 ZFP62Q8NB50 900 aaPredicted RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 ADCY4Q8NFM4 1077 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 OR7A2PQ8NGA2 310 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 GOT1L1Q8NHS2 421 aaPredicted RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 FAR1Q8WVX9 515 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 OIT3Q8WWZ8 545 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 KAT2AQ92830 837 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 CIDECQ96AQ7 238 aaPredicted RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 SNRNP40Q96DI7 357 aaKnown RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 PPP1R36Q96LQ0 422 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 FRMD6Q96NE9 622 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 CCDC115Q96NT0 180 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 STACQ99469 402 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 SLX1AQ9BQ83 275 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 ITPAQ9BY32 194 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 MFRPQ9BY79 579 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 NXF5Q9H1B4 397 aaKnown RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 RABEP2Q9H5N1 569 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 WDR55Q9H6Y2 383 aaPredicted RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 DUSP22Q9NRW4 184 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 SIRT3Q9NTG7 399 aaPredicted RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 QPCTLQ9NXS2 382 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 PLA2G3Q9NZ20 509 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 BTNL2Q9UIR0 455 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 PCDHGB4Q9UN71 923 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 TRIM33Q9UPN9 1127 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 DTX4Q9Y2E6 619 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 COPG1Q9Y678 874 aaKnown RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 CHCHD2Q9Y6H1 151 aaPredicted RBP7.58□□□□□ -1.2
RPE-204ENST00000411934 EXPH5Q8NEV8 1989 aa7.58□□□□□ -1.2
RPE-204ENST00000411934 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 ACOT7O00154 380 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 SCN2BO60939 215 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 NKX2-2O95096 273 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 SNX4O95219 450 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 AK1P00568 194 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 P04436 131 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 PGRP06401 933 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 CT45A8P0DMV1 189 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 CT45A9P0DMV2 189 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 PLA2G2AP14555 144 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 CNR1P21554 472 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 S100A3P33764 101 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 KRT20P35900 424 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 MDH1P40925 334 aaKnown RBP7.57□□□□□ -1.2
RPE-204ENST00000411934 IDH3AP50213 366 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 PNLIPRP2P54317 469 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 AQP5P55064 265 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 ZNF155Q12901 538 aaPredicted RBP7.57□□□□□ -1.2
RPE-204ENST00000411934 PRSS53Q2L4Q9 553 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 HYAL4Q2M3T9 481 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.57□□□□□ -1.2
RPE-204ENST00000411934 FAM174BQ3ZCQ3 159 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 KRTCAP3Q53RY4 240 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 CT45A2Q5DJT8 189 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 SLC22A10Q63ZE4 541 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 NXNQ6DKJ4 435 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 SPINK14Q6IE38 97 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 FAM180BQ6P0A1 224 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 IL20RBQ6UXL0 311 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 FAM47EQ6ZV65 393 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 ZNF551Q7Z340 670 aaPredicted RBP7.57□□□□□ -1.2
RPE-204ENST00000411934 NUP54Q7Z3B4 507 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 MIER2Q8N344 545 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 KRTCAP2Q8N6L1 136 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 TRIML2Q8N7C3 387 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 ST6GALNAC3Q8NDV1 305 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 CATSPER1Q8NEC5 780 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 NUP43Q8NFH3 380 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 MIPOL1Q8TD10 442 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 TSPEARQ8WU66 669 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 RNF138Q8WVD3 245 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 NR4A3Q92570 626 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 NTNG2Q96CW9 530 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 TMCO6Q96DC7 493 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 FAM120BQ96EK7 910 aaKnown RBP7.57□□□□□ -1.2
RPE-204ENST00000411934 GIMAP5Q96F15 307 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 OR52B2Q96RD2 323 aa7.57□□□□□ -1.2
RPE-204ENST00000411934 FAM173AQ9BQD7 235 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms