RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 NME5P56597 212 aa20.59■□□□□ 0.89
PTCD3-203ENST00000409783 GUCY1A3Q02108 690 aa20.59■□□□□ 0.89
PTCD3-203ENST00000409783 SRSF11Q05519 484 aaKnown RBP20.59■□□□□ 0.89
PTCD3-203ENST00000409783 PDCD4Q53EL6 469 aaKnown RBP20.59■□□□□ 0.89
PTCD3-203ENST00000409783 SPANXN4Q5MJ08 99 aa20.59■□□□□ 0.89
PTCD3-203ENST00000409783 EXOSC6Q5RKV6 272 aaKnown RBP20.59■□□□□ 0.89
PTCD3-203ENST00000409783 FAM180AQ6UWF9 173 aa20.59■□□□□ 0.89
PTCD3-203ENST00000409783 OR10G3Q8NGC4 313 aa20.59■□□□□ 0.89
PTCD3-203ENST00000409783 FAM120BQ96EK7 910 aaKnown RBP20.59■□□□□ 0.89
PTCD3-203ENST00000409783 CXorf36Q9H7Y0 433 aa20.59■□□□□ 0.89
PTCD3-203ENST00000409783 TCF7L2Q9NQB0 619 aa20.59■□□□□ 0.89
PTCD3-203ENST00000409783 SDR39U1Q9NRG7 319 aaPredicted RBP20.59■□□□□ 0.89
PTCD3-203ENST00000409783 A0A0G2JMM0 328 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 A0A1W2PPB8 328 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 A0A1W2PRS3 328 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 PINLYPA6NC86 204 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 KIR3DP1A8MWS1 328 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 UBDO15205 165 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 EMC8O43402 210 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 PEX1O43933 1283 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 WISP2O76076 250 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 NAGAP17050 411 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 KIR3DL1P43629 444 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 ZFP36L2P47974 494 aaKnown RBP20.58■□□□□ 0.89
PTCD3-203ENST00000409783 NRG3P56975 720 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 FBXW4P57775 412 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 HBA1P69905 142 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 GSTA3Q16772 222 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 ACAD11Q709F0 780 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 CLECL1Q8IZS7 167 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 CPSF7Q8N684 471 aaKnown RBP20.58■□□□□ 0.89
PTCD3-203ENST00000409783 BCORP1Q8N888 145 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 DNAJB8Q8NHS0 232 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 STON2Q8WXE9 905 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 NTNG2Q96CW9 530 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 SLX1AQ9BQ83 275 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 LMF2Q9BU23 707 aaKnown RBP20.58■□□□□ 0.89
PTCD3-203ENST00000409783 CCDC28BQ9BUN5 200 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 CCDC134Q9H6E4 229 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 PROK2Q9HC23 129 aa20.58■□□□□ 0.89
PTCD3-203ENST00000409783 CNOT11Q9UKZ1 510 aaKnown RBP20.58■□□□□ 0.89
PTCD3-203ENST00000409783 SVILO95425 2214 aa20.58■□□□□ 0.88
PTCD3-203ENST00000409783 NINQ8N4C6 2090 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 FASNP49327 2511 aaKnown RBP20.57■□□□□ 0.88
PTCD3-203ENST00000409783 C9JVG2 144 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 E9PBE3 544 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 J3QKU1 62 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 RNASET2O00584 256 aaKnown RBP20.57■□□□□ 0.88
PTCD3-203ENST00000409783 POLR3GO15318 223 aaPredicted RBP20.57■□□□□ 0.88
PTCD3-203ENST00000409783 PPM1BO75688 479 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 ABCB1P08183 1280 aaPredicted RBP20.57■□□□□ 0.88
PTCD3-203ENST00000409783 MRPL19P49406 292 aaKnown RBP20.57■□□□□ 0.88
PTCD3-203ENST00000409783 MEOX1P50221 254 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 TDGF1P3P51864 188 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 GPR85P60893 370 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 ZNF155Q12901 538 aaPredicted RBP20.57■□□□□ 0.88
PTCD3-203ENST00000409783 RPS6KA2Q15349 733 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 DPY19L1Q2PZI1 675 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 FAM174BQ3ZCQ3 159 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 RNFT1Q5M7Z0 435 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 SLC22A10Q63ZE4 541 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 DESI1Q6ICB0 168 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 WDR53Q7Z5U6 358 aaPredicted RBP20.57■□□□□ 0.88
PTCD3-203ENST00000409783 SLC34A3Q8N130 599 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 ZFP62Q8NB50 900 aaPredicted RBP20.57■□□□□ 0.88
PTCD3-203ENST00000409783 FAM13CQ8NE31 585 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 NUP43Q8NFH3 380 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 OR4N2Q8NGD1 307 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 RFWD2Q8NHY2 731 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 NR4A3Q92570 626 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 HGDQ93099 445 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 OMA1Q96E52 524 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 THOC1Q96FV9 657 aaKnown RBP20.57■□□□□ 0.88
PTCD3-203ENST00000409783 AGPAT4Q9NRZ5 378 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 SACM1LQ9NTJ5 587 aa20.57■□□□□ 0.88
PTCD3-203ENST00000409783 CAPN14A8MX76 684 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 KLRC4-KLRK1H3BQV0 150 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 CNR1P21554 472 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 MST1P26927 711 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 MDH1P40925 334 aaKnown RBP20.56■□□□□ 0.88
PTCD3-203ENST00000409783 TMED10P49755 219 aaKnown RBP20.56■□□□□ 0.88
PTCD3-203ENST00000409783 PLCXD2Q0VAA5 305 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 SLC44A2Q8IWA5 706 aaPredicted RBP20.56■□□□□ 0.88
PTCD3-203ENST00000409783 FBXW8Q8N3Y1 598 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 OR2M7Q8NG81 312 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 OR5M3Q8NGP4 307 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 SPPL2AQ8TCT8 520 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 TMBIM1Q969X1 311 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 MS4A4EQ96PG1 132 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 C3orf14Q9HBI5 128 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 NEUROD4Q9HD90 331 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 OLAHQ9NV23 265 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 ZIM2Q9NZV7 527 aa20.56■□□□□ 0.88
PTCD3-203ENST00000409783 HELZ2Q9BYK8 2649 aaKnown RBP20.56■□□□□ 0.88
PTCD3-203ENST00000409783 PRSS51A0A1B0GVH4 220 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 G3V3Y1 287 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 TSPAN2O60636 221 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 CRYABP02511 175 aaKnown RBP20.55■□□□□ 0.88
PTCD3-203ENST00000409783 PIGAP37287 484 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 DGKQP52824 942 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms