RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 CDC73Q6P1J9 531 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 C16orf62Q7Z3J2 963 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 ZNF655Q8N720 491 aaPredicted RBP18.86■□□□□ 0.61
USP39-204ENST00000409766 SIMC1Q8NDZ2 872 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 ADAMTS15Q8TE58 950 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 SLC6A18Q96N87 628 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 NDOR1Q9UHB4 597 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 TPST2O60704 377 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 ALPPP05187 535 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 TARDBPQ13148 414 aaKnown RBP eCLIP18.85■□□□□ 0.61
USP39-204ENST00000409766 GAS6Q14393 721 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 TBCEQ15813 527 aaPredicted RBP18.85■□□□□ 0.61
USP39-204ENST00000409766 FAM214AQ32MH5 1076 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 OOSP2Q86WS3 158 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 SHISA5Q8N114 240 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 FAM46DQ8NEK8 389 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 TSTD1Q8NFU3 115 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 ZDHHC1Q8WTX9 485 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 FCGR1BQ92637 280 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 DTNBP1Q96EV8 351 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 POLR2J3Q9H1A7 115 aaKnown RBP18.85■□□□□ 0.61
USP39-204ENST00000409766 LMAN1LQ9HAT1 526 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 IL21RQ9HBE5 538 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 PTGFRNQ9P2B2 879 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 CHST2Q9Y4C5 530 aa18.85■□□□□ 0.61
USP39-204ENST00000409766 SH3D21A4FU49 640 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 FCMRO60667 390 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 SOX14O95416 240 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 IGFBP1P08833 259 aaPredicted RBP18.84■□□□□ 0.61
USP39-204ENST00000409766 PORP16435 677 aaPredicted RBP18.84■□□□□ 0.61
USP39-204ENST00000409766 PDX1P52945 283 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 PTCHD4Q6ZW05 846 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 P2RY8Q86VZ1 359 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 VRK2Q86Y07 508 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 RBM12BQ8IXT5 1001 aaKnown RBP18.84■□□□□ 0.61
USP39-204ENST00000409766 CSNK1A1LQ8N752 337 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 MORN4Q8NDC4 146 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 ARHGDIGQ99819 225 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 LRRC61Q9BV99 259 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 TPSD1Q9BZJ3 242 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 GON4LQ3T8J9 2241 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 IGHV1OR15-9A0A0B4J2B8 117 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 CYR61O00622 381 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 GALR3O60755 368 aaPredicted RBP18.84■□□□□ 0.61
USP39-204ENST00000409766 AGR2O95994 175 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 TP53P04637 393 aaPredicted RBP18.84■□□□□ 0.61
USP39-204ENST00000409766 INHBBP09529 407 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 ZNF628Q5EBL2 1059 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 SLX4IPQ5VYV7 408 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 CD300LDQ6UXZ3 194 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 LINC00471Q8N535 108 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 B3GNT7Q8NFL0 401 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 CDS1Q92903 461 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 UBE2ZQ9H832 354 aaPredicted RBP18.84■□□□□ 0.61
USP39-204ENST00000409766 NECTIN3Q9NQS3 549 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 POMT2Q9UKY4 750 aa18.84■□□□□ 0.61
USP39-204ENST00000409766 GPR55Q9Y2T6 319 aaPredicted RBP18.84■□□□□ 0.61
USP39-204ENST00000409766 SLC22A1O15245 554 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 HCRTR1O43613 425 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 ZNF217O75362 1048 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 STSP08842 583 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 TYRP1P17643 537 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 TGFBR2P37173 567 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 VSX2P58304 361 aaPredicted RBP18.83■□□□□ 0.61
USP39-204ENST00000409766 ST3GAL4Q11206 333 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 INAVAQ3KP66 663 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 TRMT12Q53H54 448 aaKnown RBP18.83■□□□□ 0.61
USP39-204ENST00000409766 FHL5Q5TD97 284 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 ZER1Q7Z7L7 766 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 TMEM52Q8NDY8 209 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 OR4K5Q8NGD3 323 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 OR5T3Q8NGG3 340 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 FAM174AQ8TBP5 190 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 PLGRKTQ9HBL7 147 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 C11orf16Q9NQ32 467 aa18.83■□□□□ 0.61
USP39-204ENST00000409766 TLR4O00206 839 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 FGF17O60258 216 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 LDB3O75112 727 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 CLPXO76031 633 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 ATP1B1P05026 303 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 MMP11P24347 488 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 PRKAR1BP31321 381 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 ID2Q02363 134 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 COX10Q12887 443 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 C12orf73Q69YU5 71 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 FRRS1Q6ZNA5 592 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 SLC9A6Q92581 669 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 ITPAQ9BY32 194 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 SEMA6CQ9H3T2 930 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 FAM60AQ9NP50 221 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 CTPS2Q9NRF8 586 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 CLN6Q9NWW5 311 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 C19orf53Q9UNZ5 99 aaPredicted RBP18.83■□□□□ 0.6
USP39-204ENST00000409766 SPACA6W5XKT8 324 aa18.83■□□□□ 0.6
USP39-204ENST00000409766 B4DGG1 531 aa18.82■□□□□ 0.6
USP39-204ENST00000409766 H3BN98 237 aa18.82■□□□□ 0.6
USP39-204ENST00000409766 ST6GAL1P15907 406 aa18.82■□□□□ 0.6
USP39-204ENST00000409766 MLLT10P55197 1068 aa18.82■□□□□ 0.6
USP39-204ENST00000409766 SNRPGP62308 76 aaKnown RBP18.82■□□□□ 0.6
USP39-204ENST00000409766 LSM11P83369 360 aaKnown RBP eCLIP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms