RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 CDH2P19022 906 aaPredicted RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 NT5EP21589 574 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 HMGA2P52926 109 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 HSD11B2P80365 405 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 IL18R1Q13478 541 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 GRM7Q14831 915 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 RSPO4Q2I0M5 234 aaPredicted RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 FAM214AQ32MH5 1076 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 GPAT3Q53EU6 434 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 HEPHL1Q6MZM0 1159 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 SHISA5Q8N114 240 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 GIPC3Q8TF64 312 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 SLC35A4Q96G79 324 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 MUS81Q96NY9 551 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 DUSP23Q9BVJ7 150 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 RSPO3Q9BXY4 272 aaPredicted RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 IRAK4Q9NWZ3 460 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 KIF17Q9P2E2 1029 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 KLHL3Q9UH77 587 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 KCND3Q9UK17 655 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 MRPS33Q9Y291 106 aaKnown RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 PCDHGB2Q9Y5G2 931 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 DSPPQ9NZW4 1301 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 MYOCOSA0A1B0GUC4 107 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 LOC100130705A0A1B0GUX0 176 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 A8MVJ9 347 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 H0YIG0 161 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 CASC3O15234 703 aaKnown RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 MITFO75030 526 aaPredicted RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 UGT2B11O75310 529 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 CLPTM1O96005 669 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 MYF5P13349 255 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 PIGAP37287 484 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 YAP1P46937 504 aaKnown RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 AVPR1BP47901 424 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 LIMS1P48059 325 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 CDH12P55289 794 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 CFHR1Q03591 330 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 PRICKLE4Q2TBC4 344 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 TRMT12Q53H54 448 aaKnown RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 EXOSC6Q5RKV6 272 aaKnown RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 ZCCHC12Q6PEW1 402 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 WDR74Q6RFH5 385 aaPredicted RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 C16orf62Q7Z3J2 963 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 PRSS42Q7Z5A4 293 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 THAP5Q7Z6K1 395 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 ZNF595Q8IYB9 648 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 C8orf59Q8N0T1 100 aaPredicted RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 ZNF786Q8N393 782 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 ATG16L2Q8NAA4 619 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 TSPAN14Q8NG11 270 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 CTHRC1Q96CG8 243 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 PSD2Q9BQI7 771 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 FAM192AQ9GZU8 254 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 ACER3Q9NUN7 267 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 DLL3Q9NYJ7 618 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 MAT2BQ9NZL9 334 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 HCN3Q9P1Z3 774 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 TRIM64A6NGJ6 449 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 J3KTA2 159 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 SEC24DO94855 1032 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-206ENST00000409754 PNLIPP16233 465 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 CD1CP29017 333 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 CSF2RBP32927 897 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 RPL5P46777 297 aaKnown RBP13.16□□□□□ -0.3
LIMS2-206ENST00000409754 ARL4DP49703 201 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 RPS6KA3P51812 740 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 MGAT2Q10469 447 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 COL9A2Q14055 689 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-206ENST00000409754 MICAQ29983 383 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 EXOC3L2Q2M3D2 409 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 AMZ1Q400G9 498 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 KMT5CQ86Y97 462 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 NAXDQ8IW45 347 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 D2HGDHQ8N465 521 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 Q8N9G6 341 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-206ENST00000409754 SLC16A11Q8NCK7 471 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 OR10G2Q8NGC3 310 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 PINK1Q9BXM7 581 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 SPRTNQ9H040 489 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-206ENST00000409754 SLC38A1Q9H2H9 487 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 KRT84Q9NSB2 600 aa13.16□□□□□ -0.3
LIMS2-206ENST00000409754 RP1P56715 2156 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 AKAP13Q12802 2813 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 ARRDC5A6NEK1 342 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 H3BMH7 237 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 SYT5O00445 386 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 YKT6O15498 198 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 CTNSO60931 367 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 GADD45GO95257 159 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 LGI1O95970 557 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 ALPPP05187 535 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 LINGO3P0C6S8 592 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 ANXA8P13928 327 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 TUBA4AP68366 448 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 IGLV3-21P80748 117 aaPredicted RBP13.15□□□□□ -0.3
LIMS2-206ENST00000409754 HPCAP84074 193 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 CHRNEQ04844 493 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 ARHGAP11BQ3KRB8 267 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 COLEC12Q5KU26 742 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms