RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CAPZBP47756 277 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 CCL11P51671 97 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 RABEPKQ7Z6M1 372 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 MARCH9Q86YJ5 346 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 OR6C4Q8NGE1 309 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 OR52N2Q8NGI0 321 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 CEP76Q8TAP6 659 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 RBM4BQ9BQ04 359 aaKnown RBP10.71□□□□□ -0.69
SNX13-202ENST00000409604 RBM4Q9BWF3 364 aaKnown RBP10.71□□□□□ -0.69
SNX13-202ENST00000409604 CD320Q9NPF0 282 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 EPHA6Q9UF33 1036 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 A0A1W2PS29 197 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 AQP12BA6NM10 295 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 CLDN24A6NM45 220 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 CAPN14A8MX76 684 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 SLC22A2O15244 555 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 MRPL3P09001 348 aaKnown RBP10.71□□□□□ -0.7
SNX13-202ENST00000409604 AHRP35869 848 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 NXPH1P58417 271 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 REEP5Q00765 189 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 EXOC3L2Q2M3D2 409 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 OGFOD2Q6N063 350 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 JAZF1Q86VZ6 243 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 AQP12AQ8IXF9 295 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 WDR36Q8NI36 951 aaKnown RBP10.71□□□□□ -0.7
SNX13-202ENST00000409604 TMEM203Q969S6 136 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 SENP5Q96HI0 755 aaPredicted RBP10.71□□□□□ -0.7
SNX13-202ENST00000409604 TSSK6Q9BXA6 273 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 LRRN3Q9H3W5 708 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 APMAPQ9HDC9 416 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 MKKSQ9NPJ1 570 aaPredicted RBP10.71□□□□□ -0.7
SNX13-202ENST00000409604 PPP4R1LQ9P1A2 415 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 CTSFQ9UBX1 484 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 CARD8Q9Y2G2 431 aa10.71□□□□□ -0.7
SNX13-202ENST00000409604 P2RX6O15547 441 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 TNFSF15O95150 251 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 TNFAIP8O95379 198 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 TCF3P15923 654 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 DCDP81605 110 aaKnown RBP10.7□□□□□ -0.7
SNX13-202ENST00000409604 SNTA1Q13424 505 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 ELOAQ14241 798 aaKnown RBP10.7□□□□□ -0.7
SNX13-202ENST00000409604 ABHD17BQ5VST6 288 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 RBM12BQ8IXT5 1001 aaKnown RBP10.7□□□□□ -0.7
SNX13-202ENST00000409604 ZZZ3Q8IYH5 903 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 IQCF1Q8N6M8 205 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 RASSF5Q8WWW0 418 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 GAB3Q8WWW8 586 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 C6orf62Q9GZU0 229 aaPredicted RBP10.7□□□□□ -0.7
SNX13-202ENST00000409604 CHST8Q9H2A9 424 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 CFL2Q9Y281 166 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 IGLV3-16A0A075B6K0 115 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 RPP14O95059 124 aaKnown RBP10.7□□□□□ -0.7
SNX13-202ENST00000409604 FURINP09958 794 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 DBTP11182 482 aaKnown RBP10.7□□□□□ -0.7
SNX13-202ENST00000409604 GRPRP30550 384 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 CHN2P52757 468 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 GAB1Q13480 694 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 PDZK1Q5T2W1 519 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 ADGRF3Q8IZF5 1079 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 TCEANCQ8N8B7 351 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 STT3BQ8TCJ2 826 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 ASB15Q8WXK1 588 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 CLMPQ9H6B4 373 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 DKKL1Q9UK85 242 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 GPR52Q9Y2T5 361 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 A8MVJ9 347 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 IDSB3KWA1 339 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 XPNPEP2O43895 674 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 GP1BBP13224 206 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 RXRGP48443 463 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 RPS18P62269 152 aaKnown RBP10.7□□□□□ -0.7
SNX13-202ENST00000409604 MXD1Q05195 221 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 UGT3A2Q3SY77 523 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 PIGGQ5H8A4 983 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 FBXO42Q6P3S6 717 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 IKZF5Q9H5V7 419 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 HPF1Q9NWY4 346 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 PADI2Q9Y2J8 665 aa10.7□□□□□ -0.7
SNX13-202ENST00000409604 FESP07332 822 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 LIM2P55344 173 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 RUNX2Q13950 521 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 MEP1AQ16819 746 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 NDUFAF6Q330K2 333 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 GXYLT1Q4G148 440 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 TMEM225Q6GV28 225 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 GALNT18Q6P9A2 607 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.69□□□□□ -0.7
SNX13-202ENST00000409604 CYB561A3Q8NBI2 242 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 BAHD1Q8TBE0 780 aaPredicted RBP10.69□□□□□ -0.7
SNX13-202ENST00000409604 FEVQ99581 238 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 SGPP1Q9BX95 441 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 ACTRT3Q9BYD9 372 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 ADORA3P0DMS8 318 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 DAG1Q14118 895 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 SLC36A3Q495N2 470 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 KBTBD2Q8IY47 623 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 OR10H5Q8NGA6 315 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 OR8J3Q8NGG0 315 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 C1GALT1C1Q96EU7 318 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 COX14Q96I36 57 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms