RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PLEKHM3Q6ZWE6 761 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF367Q7RTV3 350 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 NUDT13Q86X67 352 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 DCUN1D3Q8IWE4 304 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 OR56A3Q8NH54 315 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 CRELD1Q96HD1 420 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 TTYH2Q9BSA4 534 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 SP140LQ9H930 580 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 MED20Q9H944 212 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 KCMF1Q9P0J7 381 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 CRNNQ9UBG3 495 aaPredicted RBP12.63□□□□□ -0.39
COL6A2-204ENST00000409416 WDFY4Q6ZS81 3184 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 SLC5A10A0PJK1 596 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 CACNB4O00305 520 aaPredicted RBP12.63□□□□□ -0.39
COL6A2-204ENST00000409416 DYRK3O43781 588 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 TSPAN9O75954 239 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 H1F0P07305 194 aaKnown RBP12.63□□□□□ -0.39
COL6A2-204ENST00000409416 CLEC2LP0C7M8 214 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 MVDP53602 400 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF791Q3KP31 576 aaPredicted RBP12.63□□□□□ -0.39
COL6A2-204ENST00000409416 PYDC2Q56P42 97 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 PRRT3Q5FWE3 981 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 PDZK1Q5T2W1 519 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 NXNL2Q5VZ03 156 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 DPPA4Q7L190 304 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 FBXL6Q8N531 539 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 KLHL6Q8WZ60 621 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 TBC1D20Q96BZ9 403 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 MTERF3Q96E29 417 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 DIRAS2Q96HU8 199 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 NECTIN4Q96NY8 510 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 HDHD5Q9BXW7 423 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 TMEM168Q9H0V1 697 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 CHST8Q9H2A9 424 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 SSR3Q9UNL2 185 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 CSNK1G3Q9Y6M4 447 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 MAGEB4O15481 346 aaPredicted RBP12.63□□□□□ -0.39
COL6A2-204ENST00000409416 GUCY1B2O75343 617 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 RHCEP18577 417 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 PRKACBP22694 351 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 UGT2B10P36537 528 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 XCR1P46094 333 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 HNRNPA0Q13151 305 aaKnown RBP12.63□□□□□ -0.39
COL6A2-204ENST00000409416 TAF8Q7Z7C8 310 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 OR5T3Q8NGG3 340 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 PMEPA1Q969W9 287 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 OMA1Q96E52 524 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 TM9SF2Q99805 663 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 MAPKAP1Q9BPZ7 522 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 BEX1Q9HBH7 125 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 FRMPD3Q5JV73 1810 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 OLFM2O95897 454 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 CTSEP14091 401 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 CPN2P22792 545 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 DOC2BQ14184 412 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 EXOSC7Q15024 291 aaKnown RBP12.62□□□□□ -0.39
COL6A2-204ENST00000409416 SSX1Q16384 188 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF311Q5JNZ3 666 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 ATAT1Q5SQI0 421 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 KRT73Q86Y46 540 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 OR52E1Q8NGJ3 308 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 OR4C15Q8NGM1 316 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 FRYLO94915 3013 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 OR6C74A6NCV1 312 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 FAM25AB3EWG3 89 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 FAM25CB3EWG5 89 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 FAM25GB3EWG6 89 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 QSOX1O00391 747 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 NCR1O76036 304 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 PTTG1O95997 202 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 INSL4Q14641 139 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 PUM1Q14671 1186 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL6A2-204ENST00000409416 ZFP69Q49AA0 526 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 CRTC2Q53ET0 693 aaPredicted RBP12.62□□□□□ -0.39
COL6A2-204ENST00000409416 TRIM69Q86WT6 500 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 SMPDL3AQ92484 453 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 SPATA9Q9BWV2 254 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 FGF22Q9HCT0 170 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 MUTYHQ9UIF7 546 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 FAM47E-STBD1D6RA91 191 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 FCMRO60667 390 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 SLITRK5O94991 958 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 ACSL1P33121 698 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 AMZ1Q400G9 498 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF517Q6ZMY9 492 aaPredicted RBP12.62□□□□□ -0.39
COL6A2-204ENST00000409416 NUDT18Q6ZVK8 323 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 TECPR1Q7Z6L1 1165 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 SLC9B2Q86UD5 537 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 PIK3R3Q92569 461 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 RGMAQ96B86 450 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 LRR1Q96L50 414 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 DEPDC7Q96QD5 511 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 TRPV5Q9NQA5 729 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 MAPRE3Q9UPY8 281 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF780BQ9Y6R6 833 aa12.62□□□□□ -0.39
COL6A2-204ENST00000409416 C2orf92A0A1B0GVN3 265 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 DNAJB6O75190 326 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 REM1O75628 298 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 NUDT14O95848 222 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 ARAFP10398 606 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms