RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 OR8U9P0C7N5 309 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 IRF2P14316 349 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 MAGEA3P43357 314 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TAS2R30P59541 319 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TAS2R19P59542 299 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 PCBD1P61457 104 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 RPS24P62847 133 aaKnown RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 NKX6-1P78426 367 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 PLCXD2Q0VAA5 305 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ZNF267Q14586 743 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CATSPEREQ5SY80 951 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CCNJQ5T5M9 372 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 PPP2R2DQ66LE6 453 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ANKRD54Q6NXT1 300 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 OR13C3Q8NGS6 347 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TMEM203Q969S6 136 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ZNF486Q96H40 463 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 JSRP1Q96MG2 331 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ZNF578Q96N58 590 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 LRFN5Q96NI6 719 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 AMDHD1Q96NU7 426 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 NTMT1Q9BV86 223 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 BTBD2Q9BX70 525 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TXLNGYQ9BZA5 131 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 DNTTIP1Q9H147 329 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 NIPAL2Q9H841 368 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 EDARQ9UNE0 448 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 MOKQ9UQ07 419 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 UGT2A1Q9Y4X1 527 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 BLOC1S5-TXNDC5H3BN57 136 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 GAPDHSO14556 408 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-203ENST00000409050 SLC16A8O95907 504 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 OPN1SWP03999 348 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 SLC35E2BP0CK96 405 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 DDCP20711 480 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 C5AR1P21730 350 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 FBLP22087 321 aaKnown RBP5.8□□□□□ -1.48
SCN1A-203ENST00000409050 EDNRBP24530 442 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 CPOXP36551 454 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 TGM4P49221 684 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 OC90Q02509 493 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-203ENST00000409050 SELPLGQ14242 412 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 RSU1Q15404 277 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 GFOD2Q3B7J2 385 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 GGTA1PQ4G0N0 100 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 ZNF529Q6P280 563 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 SLC22A25Q6T423 547 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 CD300LGQ6UXG3 332 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 GAREM2Q75VX8 874 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 MISPQ8IVT2 679 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 SVBPQ8N300 66 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 ZSCAN1Q8NBB4 408 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 CASTOR1Q8WTX7 329 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 ZBED3Q96IU2 234 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-203ENST00000409050 RADILQ96JH8 1075 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 LRR1Q96L50 414 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 PRRC1Q96M27 445 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 DEFB118Q96PH6 123 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 PLEKHA3Q9HB20 300 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 AMBNQ9NP70 447 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 FBXL12Q9NXK8 326 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 LUZP4Q9P127 313 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 ANKMY1Q9P2S6 941 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 GMEB2Q9UKD1 530 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 SRPK3Q9UPE1 567 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 OR1A2Q9Y585 309 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 C2orf92A0A1B0GVN3 265 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 FUOMA2VDF0 154 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 WNT7AO00755 349 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 TGM5O43548 720 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 SNAP29O95721 258 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 ALDOAP04075 364 aaKnown RBP5.8□□□□□ -1.48
SCN1A-203ENST00000409050 ACPPP15309 386 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 CDKN1CP49918 316 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-203ENST00000409050 RAB28P51157 221 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 FXYD6P3P58550 94 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 LTB4RQ15722 352 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 C15orf39Q6ZRI6 1047 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 COMMD7Q86VX2 200 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 ABHD11Q8NFV4 315 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 FAM110BQ8TC76 370 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 BRIX1Q8TDN6 353 aaKnown RBP5.8□□□□□ -1.48
SCN1A-203ENST00000409050 FOXJ1Q92949 421 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 MSANTD3Q96H12 275 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 MRGPRX2Q96LB1 330 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 STRA6Q9BX79 667 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 ARHGAP39Q9C0H5 1083 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 KCNJ16Q9NPI9 418 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 ACSS1Q9NUB1 689 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-203ENST00000409050 KLK4Q9Y5K2 254 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 FMO6PO60774 539 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 ZNF217O75362 1048 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 PRKCGP05129 697 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 RPS2P15880 293 aaKnown RBP5.8□□□□□ -1.48
SCN1A-203ENST00000409050 FKBP2P26885 142 aaKnown RBP5.8□□□□□ -1.48
SCN1A-203ENST00000409050 ACY1Q03154 408 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 GPM6BQ13491 265 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 CEACAM7Q14002 265 aa5.8□□□□□ -1.48
SCN1A-203ENST00000409050 KIR2DS3Q14952 304 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms