RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 COX20Q5RI15 118 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 PRAMEF8Q5VWM4 474 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 PRAMEF7Q5VXH5 474 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 GTF2IRD2BQ6EKJ0 949 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 TMEM64Q6YI46 380 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 C6orf120Q7Z4R8 191 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 GTF2IRD2Q86UP8 949 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 SFTPA2Q8IWL1 248 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 PARP8Q8N3A8 854 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 OR10Q1Q8NGQ4 319 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 WDR36Q8NI36 951 aaKnown RBP12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 C9orf43Q8TAL5 461 aaPredicted RBP12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 PHF10Q8WUB8 498 aaKnown RBP12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 PATE1Q8WXA2 126 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 MAL2Q969L2 176 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 TAMM41Q96BW9 452 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 PPP1R14BQ96C90 147 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 KCNC2Q96PR1 638 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 BBS4Q96RK4 519 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 MENTQ9BUN1 341 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 IMP3Q9NV31 184 aaKnown RBP12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 GPATCH2Q9NW75 528 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 CALML5Q9NZT1 146 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 ENPP5Q9UJA9 477 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 WDR37Q9Y2I8 494 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 TESMINQ9Y4I5 508 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 MYO9AB2RTY4 2548 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 LY6G6EA0A0G2JKS1 128 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 KIR2DS5A0A0G2JLQ3 304 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 A0A0G2JNG1 304 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 SH3D21A4FU49 640 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 A6NCN8 305 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 URADA6NGE7 173 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 OR5K4A6NMS3 321 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 OR52A4PA6NMU1 304 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 CDRT15L2A8MXV6 281 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 E9PQ18 207 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 KIR2DS3K7RE56 304 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 MITFO75030 526 aaPredicted RBP12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 KLHL18O94889 574 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 DIRAS1O95057 198 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 ATE1O95260 518 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 SFTPCP11686 197 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 PCMT1P22061 227 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 IFNA8P32881 189 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 CDH12P55289 794 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 MAZP56270 477 aaKnown RBP12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 CYP4F2P78329 520 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 SRSF6Q13247 344 aaKnown RBP12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 TP53BP2Q13625 1128 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 KIR2DS5Q14953 304 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 C16orf72Q14CZ0 275 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 NR0B2Q15466 257 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 TGIF1Q15583 401 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 ZIC1Q15915 447 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 KIF26BQ2KJY2 2108 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 MPEG1Q2M385 716 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 C14orf28Q4W4Y0 310 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 SYT6Q5T7P8 510 aaPredicted RBP12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 GUSBP11Q6P575 273 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 IGF2-ASQ6U949 168 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 B3GNT8Q7Z7M8 397 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 SLC35F3Q8IY50 421 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 LGI4Q8N135 537 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 C2orf73Q8N5S3 287 aaPredicted RBP12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 ANKRD53Q8N9V6 530 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 OR56A1Q8NGH5 318 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 OR4C15Q8NGM1 316 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 OR2A1Q8NGT9 310 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 BBS10Q8TAM1 723 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 CNIH3Q8TBE1 160 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 MIPOL1Q8TD10 442 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 ZFPM2Q8WW38 1151 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 S100ZQ8WXG8 99 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 SLC35G5Q96KT7 338 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 FEVQ99581 238 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 CXorf36Q9H7Y0 433 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 C3orf14Q9HBI5 128 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 ANKHQ9HCJ1 492 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 CUEDC1Q9NWM3 386 aaPredicted RBP12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 IMPAD1Q9NX62 359 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 OR6C2Q9NZP2 312 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 SCHIP1Q9P0W5 487 aaPredicted RBP12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 ATXN7L1Q9ULK2 861 aaPredicted RBP12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 MGAT4BQ9UQ53 548 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 ENTPD4Q9Y227 616 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 U3KQA8 63 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 LRRK2Q5S007 2527 aa12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 TLN1Q9Y490 2541 aaKnown RBP12.12□□□□□ -0.47
SMARCB1-203ENST00000407082 A0A0A6YYD5 115 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 LRIT2A6NDA9 550 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 AGRPO00253 132 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 B4GAT1O43505 415 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 GCM2O75603 506 aaPredicted RBP12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 AGR2O95994 175 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 SERPIND1P05546 499 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 ZNF10P21506 573 aaPredicted RBP12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 AGXTP21549 392 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 MATN1P21941 496 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms